1L1D
Crystal structure of the C-terminal methionine sulfoxide reductase domain (MsrB) of N. gonorrhoeae pilB
Experimental procedure
Experimental method | MAD |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 5.0.2 |
Synchrotron site | ALS |
Beamline | 5.0.2 |
Temperature [K] | 103 |
Detector technology | CCD |
Collection date | 2001-07-21 |
Detector | ADSC QUANTUM |
Wavelength(s) | 0.9792, 0.9793, 0.9611 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 67.354, 68.078, 62.777 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 27.200 - 1.850 |
R-factor | 0.207 * |
Rwork | 0.207 |
R-free | 0.23700 * |
Structure solution method | MAD |
RMSD bond length | 0.005 |
RMSD bond angle | 1.210 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | SHARP |
Refinement software | CNS (1.1) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 27.200 | 1.920 |
High resolution limit [Å] | 1.850 | 1.850 |
Rmerge | 0.066 | 0.245 |
Total number of observations | 98562 * | |
Number of reflections | 22584 | |
<I/σ(I)> | 22.3 | 4.6 |
Completeness [%] | 89.5 | 89.1 * |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | Vapor diffusion * | 8.5 | 298 | PEG 4000, Tris, cacodylate, glycerol, pH 8.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | protein | 15 (mg/ml) | |
2 | 1 | drop | Tris | 20 (mM) | pH8.5 |
3 | 1 | drop | glycerol | 10 (%(v/v)) | |
4 | 1 | reservoir | sodium cacodylate | 0.1 (M) | pH6.5 |
5 | 1 | reservoir | PEG4000 | 30 (%(w/v)) |