1KY8
Crystal Structure of the Non-phosphorylating glyceraldehyde-3-phosphate Dehydrogenase
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | EMBL/DESY, HAMBURG BEAMLINE BW7B |
Synchrotron site | EMBL/DESY, HAMBURG |
Beamline | BW7B |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 1999-04-04 |
Detector | MARRESEARCH |
Wavelength(s) | 0.8469 |
Spacegroup name | P 62 2 2 |
Unit cell lengths | 185.200, 185.200, 132.100 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 30.000 - 2.400 |
Rwork | 0.208 |
R-free | 0.24200 |
Structure solution method | MAD |
RMSD bond length | 0.009 |
RMSD bond angle | 1.480 |
Data scaling software | SCALEPACK |
Phasing software | SOLVE |
Refinement software | X-PLOR |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 * | 2.500 |
High resolution limit [Å] | 2.400 | 2.400 |
Rmerge | 0.005 * | 0.470 * |
Total number of observations | 792801 * | |
Number of reflections | 53177 * | |
Completeness [%] | 99.2 * | 99.3 * |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.6 | 293 | sodium formate, pH 5.6, VAPOR DIFFUSION, HANGING DROP, temperature 20K |
1 | VAPOR DIFFUSION, HANGING DROP | 5.6 | 293 | sodium formate, pH 5.6, VAPOR DIFFUSION, HANGING DROP, temperature 20K |
1 | VAPOR DIFFUSION, HANGING DROP | 5.6 | 293 | sodium formate, pH 5.6, VAPOR DIFFUSION, HANGING DROP, temperature 20K |
1 | VAPOR DIFFUSION, HANGING DROP | 5.6 | 293 | sodium formate, pH 5.6, VAPOR DIFFUSION, HANGING DROP, temperature 20K |
1 | VAPOR DIFFUSION, HANGING DROP | 5.6 | 293 | sodium formate, pH 5.6, VAPOR DIFFUSION, HANGING DROP, temperature 20K |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | reservoir | sodium formate | 2.0 (M) |