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1KY8

Crystal Structure of the Non-phosphorylating glyceraldehyde-3-phosphate Dehydrogenase

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsEMBL/DESY, HAMBURG BEAMLINE BW7B
Synchrotron siteEMBL/DESY, HAMBURG
BeamlineBW7B
Temperature [K]100
Detector technologyIMAGE PLATE
Collection date1999-04-04
DetectorMARRESEARCH
Wavelength(s)0.8469
Spacegroup nameP 62 2 2
Unit cell lengths185.200, 185.200, 132.100
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution30.000 - 2.400
Rwork0.208
R-free0.24200
Structure solution methodMAD
RMSD bond length0.009
RMSD bond angle1.480
Data scaling softwareSCALEPACK
Phasing softwareSOLVE
Refinement softwareX-PLOR
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.000

*

2.500
High resolution limit [Å]2.4002.400
Rmerge0.005

*

0.470

*

Total number of observations792801

*

Number of reflections53177

*

Completeness [%]99.2

*

99.3

*

Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP5.6293sodium formate, pH 5.6, VAPOR DIFFUSION, HANGING DROP, temperature 20K
1VAPOR DIFFUSION, HANGING DROP5.6293sodium formate, pH 5.6, VAPOR DIFFUSION, HANGING DROP, temperature 20K
1VAPOR DIFFUSION, HANGING DROP5.6293sodium formate, pH 5.6, VAPOR DIFFUSION, HANGING DROP, temperature 20K
1VAPOR DIFFUSION, HANGING DROP5.6293sodium formate, pH 5.6, VAPOR DIFFUSION, HANGING DROP, temperature 20K
1VAPOR DIFFUSION, HANGING DROP5.6293sodium formate, pH 5.6, VAPOR DIFFUSION, HANGING DROP, temperature 20K
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11reservoirsodium formate2.0 (M)

219869

PDB entries from 2024-05-15

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