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1KW9

Crystal structure of 2,3-dihydroxybiphenyl dioxygenase (BphC) in complex with 2,3-dihydroxybiphenyl at 2.0A resolution

Replaces:  1EIM
Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPHOTON FACTORY BEAMLINE BL-6A
Synchrotron sitePhoton Factory
BeamlineBL-6A
Temperature [K]100
Detector technologyCCD
Collection date2000-02-05
DetectorADSC QUANTUM 4
Wavelength(s)1.0
Spacegroup nameI 4 2 2
Unit cell lengths121.629, 121.629, 108.753
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution84.500

*

- 1.950
R-factor0.1619
Rwork0.161
R-free0.18300

*

Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.009
RMSD bond angle1.280

*

Data reduction softwareMOSFLM
Data scaling softwareSCALA
Phasing softwareAMoRE
Refinement softwareREFMAC (5.0)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]84.500

*

2.040
High resolution limit [Å]1.950

*

1.940
Rmerge0.064
Number of reflections28532
<I/σ(I)>9.8
Completeness [%]93.593.5
Redundancy12.0

*

Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1Batch method

*

7.512

*

Uragami, Y., (2001) J.Inorg.Biochem., 83, 269.

*

Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
111protein10 (mg/ml)
211Tris-HCl100 (mM)
311ammonium sulfate27.7 (%sat)
411hexylene glycol18 (%(v/v))

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