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1KT9

Crystal Structure of C. elegans Ap4A Hydrolase

Experimental procedure
Experimental methodMAD
Source typeSYNCHROTRON
Source detailsSRS BEAMLINE PX9.6
Synchrotron siteSRS
BeamlinePX9.6
Temperature [K]100
Detector technologyCCD
Collection date2000-07-11
DetectorADSC QUANTUM 4
Wavelength(s)0.87
Spacegroup nameC 2 2 21
Unit cell lengths62.794, 72.934, 61.046
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution18.000

*

- 2.000

*

R-factor0.201

*

Rwork0.196
R-free0.21800

*

Structure solution methodMAD
RMSD bond length0.012

*

RMSD bond angle1.500

*

Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareMLPHARE
Refinement softwareREFMAC (5.0)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]18.0002.050
High resolution limit [Å]1.9801.980
Rmerge0.063

*

0.238

*

Total number of observations53439

*

Number of reflections9864
Completeness [%]97.9

*

99.8

*

Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1Vapor diffusion, hanging drop

*

5.6293PEG 4000, ammonium acetate, sodium citrate, pH 5.6, VAPOR DIFFUSION, SITTING DROP, temperature 293K
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropAppCH2ppA10 (mM)
21drop10 (mM)
31reservoirPEG400030 (%(w/v))
41reservoir0.2 (M)
51reservoirTris-HClpH8.5

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PDB entries from 2024-05-15

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