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1KQB

Structure of Nitroreductase from E. cloacae complex with inhibitor benzoate

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU RU200
Temperature [K]115
Detector technologyIMAGE PLATE
Collection date2000-12-15
DetectorRIGAKU RAXIS IV
Spacegroup nameP 1 21 1
Unit cell lengths52.840, 79.310, 96.920
Unit cell angles90.00, 93.69, 90.00
Refinement procedure
Resolution20.000 - 1.800
R-factor0.189

*

Rwork0.188
R-free0.21800

*

Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.005
RMSD bond angle1.100
Data scaling softwareSCALEPACK
Phasing softwareCNS
Refinement softwareCNS
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]20.0001.880
High resolution limit [Å]1.8001.800
Rmerge0.0650.162
Number of reflections72079
<I/σ(I)>20.38.3
Completeness [%]97.5

*

93.5

*

Redundancy3.743.51
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7

*

4

*

homopipes, benzoate, PEG 4000, pH 4.8, VAPOR DIFFUSION, HANGING DROP, temperature 277K
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropprotein4.75 (mg/ml)
21dropHEPES10 (mM)pH7.
31drop50 (mM)
41reservoirhomopipes100 (mg/ml)pH4.8
51reservoiracetate25 (mM)
61reservoirPEG400015 (%)

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PDB entries from 2024-05-15

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