1KQB
Structure of Nitroreductase from E. cloacae complex with inhibitor benzoate
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU RU200 |
Temperature [K] | 115 |
Detector technology | IMAGE PLATE |
Collection date | 2000-12-15 |
Detector | RIGAKU RAXIS IV |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 52.840, 79.310, 96.920 |
Unit cell angles | 90.00, 93.69, 90.00 |
Refinement procedure
Resolution | 20.000 - 1.800 |
R-factor | 0.189 * |
Rwork | 0.188 |
R-free | 0.21800 * |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.005 |
RMSD bond angle | 1.100 |
Data scaling software | SCALEPACK |
Phasing software | CNS |
Refinement software | CNS |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 20.000 | 1.880 |
High resolution limit [Å] | 1.800 | 1.800 |
Rmerge | 0.065 | 0.162 |
Number of reflections | 72079 | |
<I/σ(I)> | 20.3 | 8.3 |
Completeness [%] | 97.5 * | 93.5 * |
Redundancy | 3.74 | 3.51 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 * | 4 * | homopipes, benzoate, PEG 4000, pH 4.8, VAPOR DIFFUSION, HANGING DROP, temperature 277K |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | protein | 4.75 (mg/ml) | |
2 | 1 | drop | HEPES | 10 (mM) | pH7. |
3 | 1 | drop | 50 (mM) | ||
4 | 1 | reservoir | homopipes | 100 (mg/ml) | pH4.8 |
5 | 1 | reservoir | acetate | 25 (mM) | |
6 | 1 | reservoir | PEG4000 | 15 (%) |