1KK6
Crystal Structure of Vat(D) (Form I)
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | ROTATING ANODE |
| Source details | RIGAKU RU200 |
| Temperature [K] | 298 |
| Detector technology | AREA DETECTOR |
| Collection date | 1999-06-01 |
| Detector | XENTRONICS |
| Wavelength(s) | 1.5418 |
| Spacegroup name | P 21 21 21 |
| Unit cell lengths | 68.600, 102.600, 107.500 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 99.000 - 2.500 |
| R-factor | 0.206 |
| Rwork | 0.203 |
| R-free | 0.28000 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | BASED ON PDB ENTRY 1XAT |
| RMSD bond length | 0.010 |
| RMSD bond angle | 1.500 |
| Data reduction software | X-GEN |
| Data scaling software | XDS |
| Phasing software | AMoRE |
| Refinement software | X-PLOR (3.851) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 99.000 | 2.600 |
| High resolution limit [Å] | 2.500 | 2.500 |
| Rmerge | 0.082 | 0.269 |
| Total number of observations | 106003 * | |
| Number of reflections | 26649 | |
| Completeness [%] | 99.0 | 96.4 |
| Redundancy | 4.0 * |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 8 | 298 | PEG 400, ethanol, sodium citrate, tris-HCl, pH 8.0, VAPOR DIFFUSION, HANGING DROP, temperature 298K |
Crystallization Reagents in Literatures
| ID | crystal ID | solution | reagent name | concentration (unit) | details |
| 1 | 1 | reservoir | PEG400 | 25-35 (%) | |
| 2 | 1 | reservoir | ethanol | 5-8 (%) | |
| 3 | 1 | reservoir | Tris-HCl | 0.2 (M) | pH8.0 |






