1JJ8
Testing the Water-Mediated HIN Recombinase DNA Recognition by Systematic Mutations
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | ROTATING ANODE |
| Temperature [K] | 100 |
| Detector technology | IMAGE PLATE |
| Collection date | 1995-09-01 |
| Detector | RIGAKU |
| Spacegroup name | C 2 2 21 |
| Unit cell lengths | 66.328, 68.693, 62.136 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 25.000 - 2.750 |
| R-factor | 0.2134 |
| Rwork | 0.213 |
| R-free | 0.27710 |
| Structure solution method | SIRAS |
| Starting model (for MR) | SIRAS PHASES |
| RMSD bond length | 0.009 |
| RMSD bond angle | 19.410 * |
| Data reduction software | DENZO |
| Data scaling software | SCALEPACK |
| Phasing software | SOLVE |
| Refinement software | CNS |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 25.000 | 2.870 |
| High resolution limit [Å] | 2.750 | 2.750 |
| Rmerge | 0.081 * | 0.222 * |
| Number of reflections | 3765 | |
| <I/σ(I)> | 19.6 | 4.5 |
| Completeness [%] | 96.5 | 91.6 * |
| Redundancy | 15. * | 4.2 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | Vapor diffusion, sitting drop * | 4.6 | 21 * | 0.08 MM DNA, 0.04 MM HIN, 25 MM NA ACETATE (PH 4.6), 25 MM MGCL2, 8 MM NACL, 6.3% V/V PEG400, AND 1.25 MM NA CACODYLATE. RESERVOIR SOLUTION CONTAINS 100 MM NA ACETATE (PH 4.6), 100 MM MGCL2, AND 25% PEG400. CONCENTRATION OF PEG400 IN RESERVOIR SOLUTION WAS INCREASED IN 5% INCREMENTS TO 35%. CONDITIONS FOR NATIVE ARE THE SAME EXCEPT THE CONCENTRATION OF MGCL2 IS 5 TIMES SMALLER., pH 4.60, VAPOR DIFFUSION, HANGING DROP |
Crystallization Reagents
| ID | crystal ID | solution ID | reagent name | concentration | details |
| 1 | 1 | 1 | DNA | ||
| 10 | 1 | 2 | PEG 400 | ||
| 2 | 1 | 1 | HIN | ||
| 3 | 1 | 1 | sodium acetate | ||
| 4 | 1 | 1 | MgCl2 | ||
| 5 | 1 | 1 | NaCl | ||
| 6 | 1 | 1 | PEG 400 | ||
| 7 | 1 | 1 | sodium cacodylate | ||
| 8 | 1 | 2 | sodium acetate | ||
| 9 | 1 | 2 | MgCl2 |
Crystallization Reagents in Literatures
| ID | crystal ID | solution | reagent name | concentration (unit) | details |
| 1 | 1 | reservoir | 20-100 (mM) | ||
| 2 | 1 | reservoir | 100 (mM) | pH4.6 | |
| 3 | 1 | reservoir | PEG400 | 25 (%) |






