1JA3
Crystal Structure of the Murine NK Cell Inhibitory Receptor Ly-49I
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSLS BEAMLINE X9B |
Synchrotron site | NSLS |
Beamline | X9B |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2000-11-10 |
Detector | ADSC QUANTUM 4 |
Wavelength(s) | 0.98 |
Spacegroup name | H 3 |
Unit cell lengths | 91.733, 91.733, 89.584 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 50.000 * - 3.000 |
Rwork | 0.333 |
R-free | 0.28270 * |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1qo3 |
RMSD bond length | 0.007 * |
RMSD bond angle | 1.400 * |
Data reduction software | DENZO |
Data scaling software | SCALA |
Phasing software | CNS |
Refinement software | CNS |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | |
High resolution limit [Å] | 3.000 * | 3.000 |
Rmerge | 0.061 * | 0.255 * |
Total number of observations | 65472 * | |
Number of reflections | 4739 * | |
<I/σ(I)> | 0.24 | |
Completeness [%] | 94.9 * | 75.6 * |
Redundancy | 5.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 9.5 | 4 * | PEG 8000 12%, NaCl 0.2 M, CHESS 0.1 M, pH 9.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | protein | 10 (mg/ml) | |
2 | 1 | reservoir | PEG8000 | 12 (%(w/v)) | |
3 | 1 | reservoir | 0.2 (M) | ||
4 | 1 | reservoir | CHES | 0.1 (M) | pH9.5 |