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1IYS

Crystal Structure of Class A beta-Lactamase Toho-1

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPHOTON FACTORY BEAMLINE BL-18B
Synchrotron sitePhoton Factory
BeamlineBL-18B
Temperature [K]100
Detector technologyCCD
Collection date2000-11-23
DetectorADSC QUANTUM 4
Wavelength(s)1.0
Spacegroup nameP 32 2 1
Unit cell lengths72.592, 72.592, 97.891
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution20.000

*

- 1.650
R-factor0.184
Rwork0.182
R-free0.19700
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.009
RMSD bond angle1.400
Data reduction softwareMOSFLM
Data scaling softwareSCALA
Phasing softwareAMoRE
Refinement softwareCNS (1.0)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]23.800

*

1.750
High resolution limit [Å]1.6501.650
Rmerge0.072

*

0.102

*

Total number of observations631678

*

Number of reflections36271

*

5246

*

Completeness [%]100.099.9

*

Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7

*

15-20

*

ammonium sulfate, sodium acetate, acetate, pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 298.0K
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropTris-HCl5 (mM)pH7.0
21dropprotein10 (mg/ml)
31reservoirammonium sulfate1.9-2.0 (M)

231029

PDB entries from 2025-02-05

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