1IYS
Crystal Structure of Class A beta-Lactamase Toho-1
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PHOTON FACTORY BEAMLINE BL-18B |
Synchrotron site | Photon Factory |
Beamline | BL-18B |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2000-11-23 |
Detector | ADSC QUANTUM 4 |
Wavelength(s) | 1.0 |
Spacegroup name | P 32 2 1 |
Unit cell lengths | 72.592, 72.592, 97.891 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 20.000 * - 1.650 |
R-factor | 0.184 |
Rwork | 0.182 |
R-free | 0.19700 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.009 |
RMSD bond angle | 1.400 |
Data reduction software | MOSFLM |
Data scaling software | SCALA |
Phasing software | AMoRE |
Refinement software | CNS (1.0) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 23.800 * | 1.750 |
High resolution limit [Å] | 1.650 | 1.650 |
Rmerge | 0.072 * | 0.102 * |
Total number of observations | 631678 * | |
Number of reflections | 36271 * | 5246 * |
Completeness [%] | 100.0 | 99.9 * |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 * | 15-20 * | ammonium sulfate, sodium acetate, acetate, pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 298.0K |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | Tris-HCl | 5 (mM) | pH7.0 |
2 | 1 | drop | protein | 10 (mg/ml) | |
3 | 1 | reservoir | ammonium sulfate | 1.9-2.0 (M) |