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1IYB

Crystal Structure of the Nicotiana glutinosa Ribonuclease NW

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSPRING-8 BEAMLINE BL44XU
Synchrotron siteSPring-8
BeamlineBL44XU
Temperature [K]100
Detector technologyCCD
DetectorOXFORD PX210
Wavelength(s)0.9
Spacegroup nameP 21 21 21
Unit cell lengths44.800, 94.300, 98.100
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution37.400

*

- 1.500
Rwork0.212
R-free0.23000
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1dix
RMSD bond length0.005
RMSD bond angle23.400

*

Data reduction softwared*TREK
Data scaling softwared*TREK
Phasing softwareCNS
Refinement softwareCNS
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]37.400

*

1.550
High resolution limit [Å]1.5001.500
Rmerge0.0520.201
Number of reflections62367
<I/σ(I)>28.62.7
Completeness [%]93.253.8
Redundancy5.61.7
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7

*

18

*

ammonium dihydrogen, Tris-HCl, pH 8.5, VAPOR DIFFUSION, HANGING DROP, temperature 291.15K
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropprotein10 (mg/ml)
21dropsodium phosphate10 (mM)pH7.0
31reservoir5'-GMP10 (mM)

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PDB entries from 2024-05-15

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