1IWO
Crystal structure of the SR Ca2+-ATPase in the absence of Ca2+
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL44XU |
Synchrotron site | SPring-8 |
Beamline | BL44XU |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2000-12-10 |
Detector | MACSCIENCE |
Wavelength(s) | 0.900 |
Spacegroup name | P 41 |
Unit cell lengths | 71.739, 71.739, 590.300 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 15.000 - 3.100 |
R-factor | 0.237 |
Rwork | 0.237 |
R-free | 0.26800 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | cytoplasmic domains of 1EUL |
RMSD bond length | 0.009 |
RMSD bond angle | 22.200 * |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | X-PLOR |
Refinement software | CNS (1.1) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 20.000 | 3.180 |
High resolution limit [Å] | 3.100 | 3.100 |
Rmerge | 0.092 | 0.437 |
Number of reflections | 51314 | |
<I/σ(I)> | 21.3 | 3 |
Completeness [%] | 97.9 | 97.4 |
Redundancy | 7.1 * | 4.1 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | MICRODIALYSIS | 6.1 | 283 | PEG 400, MES, EGTA, glycerol, magnesium chloride, pH 6.1, MICRODIALYSIS, temperature 283K |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | 1 | enzyme | 0.020 (mM) | |
10 | 1 | 2 | butylhydroxytoluene | 0.002 (mg/ml) | |
11 | 1 | 2 | dithiothreitol | 0.2 (mM) | |
12 | 1 | 2 | EGTA | 0.1 (mM) | |
13 | 1 | 2 | MES | 20 (mM) | pH6.1 |
2 | 1 | 1 | 2. (mg/ml) | ||
3 | 1 | 1 | Ca2+ | 1 (mM) | |
4 | 1 | 1 | thapsigargin | 0.030 (mM) | |
5 | 1 | 1 | EGTA | 3 (mM) | |
6 | 1 | 2 | glycerol | 2.75 (M) | |
7 | 1 | 2 | PEG400 | 4 (%) | |
8 | 1 | 2 | 3 (mM) | ||
9 | 1 | 2 | 2.5 (mM) |