1IRE
Crystal Structure of Co-type nitrile hydratase from Pseudonocardia thermophila
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PHOTON FACTORY BEAMLINE BL-6A |
Synchrotron site | Photon Factory |
Beamline | BL-6A |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2001-02-17 |
Detector | ADSC QUANTUM 4 |
Wavelength(s) | 1.0 |
Spacegroup name | P 32 2 1 |
Unit cell lengths | 65.501, 65.501, 184.614 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 30.000 * - 1.800 |
R-factor | 0.1786 |
Rwork | 0.178 |
R-free | 0.19100 * |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2ahj |
RMSD bond length | 0.005 |
RMSD bond angle | 22.400 * |
Data reduction software | MOSFLM |
Data scaling software | SCALA |
Phasing software | AMoRE |
Refinement software | CNS (1.0) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 28.030 | 1.900 |
High resolution limit [Å] | 1.800 | 1.800 |
Rmerge | 0.090 * | 0.331 * |
Total number of observations | 431214 * | |
Number of reflections | 43623 * | |
<I/σ(I)> | 5.9 | 2.2 |
Completeness [%] | 99.8 * | 100 |
Redundancy | 9.9 | 9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 5 * | sodium citrate, HEPES-NaOH, pH 7.5, VAPOR DIFFUSION, SITTING DROP, temperature 278K |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | protein | 8 (mg/ml) | |
2 | 1 | reservoir | trisodium citrate | 1.4 (M) | |
3 | 1 | reservoir | HEPES-NaOH | 0.1 (M) | pH7.5 |