1I9E
TCR DOMAIN
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL9-1 |
Synchrotron site | SSRL |
Beamline | BL9-1 |
Temperature [K] | 85 |
Detector technology | IMAGE PLATE |
Detector | MARRESEARCH |
Wavelength(s) | 0.783 |
Spacegroup name | I 41 2 2 |
Unit cell lengths | 104.032, 104.032, 63.090 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 37.500 - 2.500 |
R-factor | 0.203 * |
Rwork | 0.203 |
R-free | 0.23279 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | Valpha domain of 2C TCR (PDB entry 1tcr) residues 1-115 |
RMSD bond length | 0.014 |
RMSD bond angle | 1.600 * |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | AMoRE |
Refinement software | REFMAC (5.0) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 37.500 | 2.540 |
High resolution limit [Å] | 2.500 | 2.500 |
Rmerge | 0.114 | 0.748 |
Number of reflections | 6260 * | 306 * |
<I/σ(I)> | 22.2 | 3.4 |
Completeness [%] | 99.6 | 100 |
Redundancy | 10.2 | 10.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | Vapor diffusion, sitting drop * | 7.5 | 25 * | di-sodium tartrate, NaCl, imidazole/HCl, pH 7.5, VAPOR DIFFUSION, temperature 295K |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | protein | 0.100 (mM) | |
2 | 1 | reservoir | Na2-tartrate | 1 (M) | |
3 | 1 | reservoir | 0.2 (M) | ||
4 | 1 | reservoir | imidazole-HCl | 0.1 (M) | pH7.5 |