1I7T
CRYSTAL STRUCTURE OF CLASS I MHC A2 IN COMPLEX WITH PEPTIDE P1049-5V
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU RU200 |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Detector | RIGAKU RAXIS II |
Spacegroup name | P 1 |
Unit cell lengths | 49.920, 62.930, 74.700 |
Unit cell angles | 82.02, 76.28, 77.96 |
Refinement procedure
Resolution | 30.000 - 2.800 |
R-factor | 0.23 |
Rwork | 0.229 |
R-free | 0.28500 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.007 |
RMSD bond angle | 1.340 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | AMoRE |
Refinement software | REFMAC |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 * | 2.850 |
High resolution limit [Å] | 2.800 | 2.750 |
Rmerge | 0.148 | 0.379 |
Number of reflections | 20521 | |
<I/σ(I)> | 7 | 9 |
Completeness [%] | 96.3 * | 96.7 |
Redundancy | 3.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 298 | used microseeding * |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | reservoir | PEG6000 | 14 (%) | |
2 | 1 | reservoir | MES | 25 (mM) | |
3 | 1 | drop | protein | 10 (mg/ml) | |
4 | 1 | drop | MES | 25 (mM) |