1HY5
CRYSTAL STRUCTURE OF THE CATALYTIC DOMAIN OF YOPE-YERSINIA PESTIS GAP EFFECTOR PROTEIN.
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | ROTATING ANODE |
| Source details | RIGAKU |
| Temperature [K] | 100 |
| Detector technology | IMAGE PLATE |
| Collection date | 2000-10-05 |
| Detector | MAR scanner 345 mm plate |
| Wavelength(s) | 1.5418 |
| Spacegroup name | C 1 2 1 |
| Unit cell lengths | 62.692, 71.978, 62.684 |
| Unit cell angles | 90.00, 113.06, 90.00 |
Refinement procedure
| Resolution | 100.000 - 2.250 |
| R-factor | 0.1761 |
| Rwork | 0.197 |
| R-free | 0.23830 |
| Structure solution method | MAD |
| RMSD bond length | 0.007 |
| RMSD bond angle | 1.400 * |
| Data reduction software | DENZO |
| Data scaling software | SCALEPACK |
| Phasing software | SOLVE |
| Refinement software | SHELXL-97 |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 30.000 * | 2.330 |
| High resolution limit [Å] | 2.250 | 2.250 |
| Rmerge | 0.060 * | 0.221 * |
| Number of reflections | 22062 * | |
| <I/σ(I)> | 16 | 4 |
| Completeness [%] | 98.9 * | 96.2 |
| Redundancy | 2.3 * | 1.8 * |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | Vapor diffusion * | 7 * | 300 | Ammonium sulphate, bicine, potassium nitrate, pH 9, VAPOR DIFFUSION, HANGING DROP, temperature 300K |
Crystallization Reagents in Literatures
| ID | crystal ID | solution | reagent name | concentration (unit) | details |
| 1 | 1 | reservoir | ammonium sulfate | 1.2-1.6 (M) | |
| 2 | 1 | reservoir | HEPES | 100 (mM) | pH7.0(or Bicine pH9.0) |
| 3 | 1 | reservoir | potassium nitrate | 100-200 (mM) |






