1HKI
Crystal structure of human chitinase in complex with glucoallosamidin B
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | EMBL/DESY, HAMBURG BEAMLINE X11 |
Synchrotron site | EMBL/DESY, HAMBURG |
Beamline | X11 |
Temperature [K] | 113 |
Detector technology | CCD |
Collection date | 2002-08-15 |
Detector | MARRESEARCH |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 94.142, 94.142, 88.425 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 25.000 * - 2.550 |
R-factor | 0.223 |
Rwork | 0.223 |
R-free | 0.27500 * |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1guv |
RMSD bond length | 0.012 |
RMSD bond angle | 1.900 * |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | CNS |
Refinement software | CNS (1.0) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 25.000 | 2.640 |
High resolution limit [Å] | 2.550 | 2.550 |
Rmerge | 0.083 | 0.661 |
Total number of observations | 52134 * | |
Number of reflections | 13275 | 1306 * |
<I/σ(I)> | 11.3 | 2.7 |
Completeness [%] | 98.7 | 100 |
Redundancy | 3.9 | 4.1 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | Vapor diffusion * | 6.5 | 25 % PEG 550 MME, 0.01 M ZNSO4, 0.1 M MES PH 6.5 |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | allosamidin derivative | 10 (mM) | |
2 | 1 | drop | protein | 8 (mg/ml) | |
3 | 1 | reservoir | PEG550 MME | 25 (%) | |
4 | 1 | reservoir | 0.01 (M) | ||
5 | 1 | reservoir | MES | 0.1 (M) | pH6.5 |