Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1HFD

HUMAN COMPLEMENT FACTOR D IN A P21 CRYSTAL FORM

Experimental procedure
Source typeROTATING ANODE
Source detailsRIGAKU RUH2R
Temperature [K]293
Detector technologyAREA DETECTOR
Collection date1993-06
DetectorSIEMENS
Spacegroup nameP 1 21 1
Unit cell lengths55.710, 51.150, 39.470
Unit cell angles90.00, 105.96, 90.00
Refinement procedure
Resolution20.000 - 2.300
R-factor0.174
Rwork0.174
R-free0.21600
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1DSU MOLECULE B
RMSD bond length0.012
RMSD bond angle28.580

*

Data reduction softwareXENGEN
Data scaling softwareXENGEN
Phasing softwareX-PLOR (3.851)
Refinement softwareX-PLOR (3.851)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]20.0002.400
High resolution limit [Å]2.3002.300
Rmerge0.0830.242
Total number of observations36098

*

Number of reflections9267
<I/σ(I)>152.8
Completeness [%]95.079
Redundancy44
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1Vapor diffusion, hanging drop

*

5.4drop consists of equal volume of protein and reservoir solutions

*

Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropprotein8-10 (mg/ml)
21dropTris-HCl10 (mM)
31drop0.1 (M)
41reservoirPEG600014-16 (%(w/v))
51reservoirMES50 (mM)
61reservoirDMSO10 (%)

220113

PDB entries from 2024-05-22

PDB statisticsPDBj update infoContact PDBjnumon