1H3W
Structural analysis of human IgG-Fc glycoforms reveals a correlation between glycosylation and structural integrity
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU RU200 |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2001-09-15 |
Detector | MARRESEARCH |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 49.550, 149.250, 75.750 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 50.000 - 2.820 * |
R-factor | 0.279 |
Rwork | 0.279 |
R-free | 0.32000 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1fc1 |
RMSD bond length | 0.008 |
RMSD bond angle | 1.400 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | AMoRE |
Refinement software | CNS (1.0) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | |
High resolution limit [Å] | 2.820 | |
Rmerge | 0.082 | 0.538 * |
Number of reflections | 6718 | |
Completeness [%] | 97.5 | 75.6 * |
Redundancy | 2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | Vapor diffusion, sitting drop * | 6 * | 4 * | DIALYSIS AGAINST WATER, pH 6.50 |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | protein | 10 (mg/ml) | |
2 | 1 | drop | MES/Tris | 20 (mM) | pH6 |
3 | 1 | reservoir | sodium acetic acid | 0.1 (M) | pH4.5 |
4 | 1 | reservoir | 2 (M) |