1H2C
Ebola virus matrix protein VP40 N-terminal domain in complex with RNA (High-resolution VP40[55-194] variant).
Experimental procedure
Experimental method | MAD |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID14-2 |
Synchrotron site | ESRF |
Beamline | ID14-2 |
Temperature [K] | 100 |
Spacegroup name | P 4 2 2 |
Unit cell lengths | 80.510, 80.510, 46.770 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 40.000 - 1.600 |
R-factor | 0.165 |
Rwork | 0.164 |
R-free | 0.18200 |
Structure solution method | MAD |
RMSD bond length | 0.008 * |
RMSD bond angle | 1.180 * |
Data reduction software | MOSFLM |
Data scaling software | SCALA |
Refinement software | REFMAC |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 40.000 | |
High resolution limit [Å] | 1.600 | |
Rmerge | 0.065 | 0.341 * |
Total number of observations | 167556 * | |
Number of reflections | 19961 * | |
<I/σ(I)> | 7.1 | |
Completeness [%] | 95.9 | 78.2 * |
Redundancy | 8.4 | 2.9 * |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | Vapor diffusion * | 7.5 | 1 UL OF PROTEIN SOLUTION (10 MG/ML) AND 1 UL OF WELL SOLUTION (100 MM HEPES PH 7.5, 1.5 M NH4H2PO4,15 % MPD). HANGING DROP. |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | protein | 10 (mg/ml) | |
2 | 1 | reservoir | HEPES | 100 (mM) | pH7.5 |
3 | 1 | reservoir | 1.5 (M) | ||
4 | 1 | reservoir | MPD | 15 (%) |