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1GYX

The Crystal Structure of YdcE, a 4-Oxalocrotonate Tautomerase Homologue from Escherichia coli, Confirms the Structural Basis for Oligomer Diversity

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU RU200
Temperature [K]110
Detector technologyIMAGE PLATE
Collection date2000-10-15
DetectorRIGAKU IMAGE PLATE
Spacegroup nameP 21 21 21
Unit cell lengths44.566, 46.525, 75.724
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution25.000 - 1.350
Rwork0.142
R-free0.16400
Structure solution methodMIR
RMSD bond length0.009

*

RMSD bond angle1.500

*

Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareSOLVE
Refinement softwareREFMAC
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]25.0001.390
High resolution limit [Å]1.3501.350
Rmerge0.0360.175
Total number of observations156715

*

Number of reflections35377
<I/σ(I)>24.73.8
Completeness [%]87.433
Redundancy2.51
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1Vapor diffusion, hanging drop

*

8.5

*

4

*

PROTEIN: 25MG/ML IN 50MM HEPES, PH 7.3, 4 CELCIUS SITTING DROP: MIX 15UL PROTEIN WITH 5UL 40% SODIUM CITRATE PH 6.5
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropprotein20 (mg/ml)
21reservoirsodium citrate40 (%(w/v))pH8.5

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PDB entries from 2024-05-15

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