1GYG
R32 CLOSED FORM OF ALPHA-TOXIN FROM CLOSTRIDIUM PERFRINGENS STRAIN CER89L43
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SRS BEAMLINE PX9.5 |
Synchrotron site | SRS |
Beamline | PX9.5 |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Detector | MARRESEARCH 300 MM |
Spacegroup name | H 3 2 |
Unit cell lengths | 151.400, 151.400, 195.500 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 30.000 * - 1.980* |
R-factor | 0.188 * |
Rwork | 0.208 |
R-free | 0.23300 * |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | INCOMPLETE EARLIER CHAIN TRACE OF OTHER CRYSTAL FORM |
RMSD bond length | 0.007 |
RMSD bond angle | 1.872 |
Data scaling software | SCALEPACK |
Phasing software | AMoRE |
Refinement software | CNS (3.1) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 30.000 | |
High resolution limit [Å] | 1.980 | |
Rmerge | 0.058 | 0.193 |
Total number of observations | 257576 * | |
Number of reflections | 56901 * | |
Completeness [%] | 87.0 | |
Redundancy | 2.6 | 2.6 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | Vapor diffusion, hanging drop * | 7.5 | 293 * | Basak, A., (1998) Acta Crystallogr., D54, 1425. * |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | protein | 9-10 (mg/ml) | |
2 | 1 | drop | Tris-HCl | 10 (mM) | pH7.5 |
3 | 1 | reservoir | 1.7 (M) | pH4.6 | |
4 | 1 | reservoir | sodium acetate |