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1GC0

CRYSTAL STRUCTURE OF THE PYRIDOXAL-5'-PHOSPHATE DEPENDENT L-METHIONINE GAMMA-LYASE FROM PSEUDOMONAS PUTIDA

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSPRING-8 BEAMLINE BL45XU
Synchrotron siteSPring-8
BeamlineBL45XU
Temperature [K]100
Detector technologyIMAGE PLATE
DetectorRIGAKU RAXIS IV++
Spacegroup nameP 1
Unit cell lengths72.861, 81.030, 81.282
Unit cell angles70.56, 63.17, 63.38
Refinement procedure
Resolution71.460 - 1.700
R-factor0.211

*

Rwork0.210
R-free0.23800

*

RMSD bond length0.005
RMSD bond angle1.237

*

Refinement softwareCNS (0.9)
Data quality characteristics
 Overall
High resolution limit [Å]1.700
Rmerge0.037
Number of reflections144898
<I/σ(I)>28.5
Completeness [%]90.8
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7.2

*

298pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11reservoirPEG600015 (%)
21reservoirammonium sulfate250 (mM)
31reservoirTris-HCl200 (mM)pH8.5
41reservoirPLP0.5 (mM)
51reservoir2-mercaptoethanol0.5 (%)
61dropprotein10-20 (mg/ml)
71dropsodium phosphate20 (mM)pH7.2
81dropPLP0.5 (mM)
91drop2-mercaptoethanol0.5 (%)

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PDB entries from 2025-06-11

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