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1G8O

CRYSTALLOGRAPHIC STRUCTURE OF THE NATIVE BOVINE ALPHA-1,3-GALACTOSYLTRANSFERASE CATALYTIC DOMAIN

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE ID14-2
Synchrotron siteESRF
BeamlineID14-2
Temperature [K]100
Detector technologyCCD
Collection date1999-09-17
DetectorCUSTOM-MADE
Wavelength(s)0.9324
Spacegroup nameP 41 21 2
Unit cell lengths95.558, 95.558, 112.711
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution15.000

*

- 2.300
R-factor0.21

*

Rwork0.274
R-free0.25000

*

Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)Model MAD solved at 2.8 Angstroms resolution 1fg5.pdb
RMSD bond length0.016
RMSD bond angle1.800
Data reduction softwareDENZO
Data scaling softwareCCP4 ((SCALA))
Phasing softwareAMoRE
Refinement softwareCNS (1.0)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]29.0002.390
High resolution limit [Å]2.3002.300
Rmerge0.0580.383

*

Total number of observations434477

*

Number of reflections31286

*

<I/σ(I)>87.8
Completeness [%]96.5

*

96

*

Redundancy6.93.7
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP8

*

20

*

1.3 to 1.6 M Sodium Acetate, 10 mM UMP, 2 mM MnCl2, 500 mM NaCl, 0.1 M cacodylate, pH 6.50, VAPOR DIFFUSION, HANGING DROP, temperature 293K
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropprotein10-20 (mg/ml)
21dropTris20 (mM)
31drop2 (mM)
41dropUMP10 (mM)
51drop500 (mM)
61reservoirsodium acetate1.3-1.6 (M)
71reservoircacodylate50 (mM)

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PDB entries from 2024-05-15

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