1G6Q
CRYSTAL STRUCTURE OF YEAST ARGININE METHYLTRANSFERASE, HMT1
Experimental procedure
Experimental method | MAD |
Source type | SYNCHROTRON |
Source details | NSLS BEAMLINE X12C |
Synchrotron site | NSLS |
Beamline | X12C |
Temperature [K] | 113 |
Detector technology | CCD |
Collection date | 2000-03-02 |
Detector | BRANDEIS |
Wavelength(s) | 0.9784,1.0100,0.9500,0.9788 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 84.100, 129.430, 101.430 |
Unit cell angles | 90.00, 102.74, 90.00 |
Refinement procedure
Resolution | 28.000 - 2.900 |
R-factor | 0.253 |
Rwork | 0.253 |
R-free | 0.29400 |
Structure solution method | MAD |
RMSD bond length | 0.014 |
RMSD bond angle | 25.060 * |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | SOLVE |
Refinement software | X-PLOR (3.851) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 28.000 | 2.990 |
High resolution limit [Å] | 2.900 | 2.890 |
Rmerge | 0.062 | 0.235 |
Total number of observations | 277416 * | |
Number of reflections | 90403 | |
<I/σ(I)> | 17.4 | 5 |
Completeness [%] | 99.1 | 95.9 |
Redundancy | 3.1 | 1.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 295 | 2 microliters of Hmt1 (8mg/ml) in 50 mM Tris, pH 7.0, 50 mM NaCl, 1 mM EDTA, 1 mM DTT + 2 microliters of reservoir:50 mM sodium hepes, pH 7.5, 14% v/v PEG 400, 100 mM CaCl2 + microseeds in 1 microliter of 20 mM sodium citrate, pH 5.6, 15% w/v PEG 4000, 100 mM ammonium acetate, VAPOR DIFFUSION, HANGING DROP, temperature 22K |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | protein | 6-8 (mg/ml) | |
2 | 1 | reservoir | sodium HEPES | 50 (mM) | |
3 | 1 | reservoir | PEG400 | 14 (%(v/v)) | |
4 | 1 | reservoir | 100 (mM) | ||
5 | 1 | reservoir | sodium citrate | 20 (mM) | |
6 | 1 | reservoir | PEG4000 | 15 (%(w/v)) | |
7 | 1 | reservoir | ammonium acetate + Hmt1 microcrystals | 100 (mM) |