1FX5
CRYSTAL STRUCTURE ANALYSIS OF ULEX EUROPAEUS LECTIN I
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | ENRAF-NONIUS FR571 |
Temperature [K] | 287 |
Detector technology | DIFFRACTOMETER |
Collection date | 1994-02-07 |
Detector | ENRAF-NONIUS FAST |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 79.610, 70.670, 122.150 |
Unit cell angles | 90.00, 108.60, 90.00 |
Refinement procedure
Resolution | 40.000 - 2.200 |
R-factor | 0.171 |
Rwork | 0.171 |
R-free | 0.21700 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | Griffonia simplicifolia lectin IV 1lec |
RMSD bond length | 0.011 |
RMSD bond angle | 26.500 * |
Data reduction software | TRUNCATE |
Data scaling software | CCP4 ((TRUNCATE)) |
Phasing software | AMoRE |
Refinement software | X-PLOR (3.1) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 40.000 | 2.320 |
High resolution limit [Å] | 2.200 | 2.200 |
Rmerge | 0.056 | 0.105 |
Number of reflections | 29087 | |
<I/σ(I)> | 9.5 | |
Completeness [%] | 89.2 | 63.9 * |
Redundancy | 2.1 | 1.2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 4 | 287 | R,S-2-methyl-2,4-pentanediol, sodium acetate, MnCl2, CaCl2, sodium cacodylate, pH 4.0, VAPOR DIFFUSION, SITTING DROP, temperature 287.0K |
1 | VAPOR DIFFUSION, SITTING DROP | 4 | 287 | R,S-2-methyl-2,4-pentanediol, sodium acetate, MnCl2, CaCl2, sodium cacodylate, pH 4.0, VAPOR DIFFUSION, SITTING DROP, temperature 287.0K |
1 | VAPOR DIFFUSION, SITTING DROP | 4 | 287 | R,S-2-methyl-2,4-pentanediol, sodium acetate, MnCl2, CaCl2, sodium cacodylate, pH 4.0, VAPOR DIFFUSION, SITTING DROP, temperature 287.0K |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | protein | 5 (mg/ml) | |
2 | 1 | drop | 0.05 (mM) | ||
3 | 1 | drop | 0.05 (mM) | ||
4 | 1 | drop | R,S-MPD | 22.5 (%) | |
5 | 1 | drop | sodium acetate | 0.05 (M) | |
6 | 1 | reservoir | R,S-MPD | 45 (%) | |
7 | 1 | reservoir | sodium acetate | 0.1 (M) |