1FV0
FIRST STRUCTURAL EVIDENCE OF THE INHIBITION OF PHOSPHOLIPASE A2 BY ARISTOLOCHIC ACID: CRYSTAL STRUCTURE OF A COMPLEX FORMED BETWEEN PHOSPHOLIPASE A2 AND ARISTOLOCHIC ACID
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | EMBL/DESY, HAMBURG BEAMLINE X11 |
Synchrotron site | EMBL/DESY, HAMBURG |
Beamline | X11 |
Temperature [K] | 180 |
Detector technology | IMAGE PLATE |
Collection date | 1999-06-20 |
Detector | MARRESEARCH |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 76.050, 89.480, 76.870 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 20.000 - 1.700 |
R-factor | 0.212 |
Rwork | 0.184 |
R-free | 0.20100 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1cl5 |
RMSD bond length | 0.007 * |
RMSD bond angle | 1.300 * |
Data scaling software | SCALEPACK |
Phasing software | AMoRE |
Refinement software | CNS (0.9) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 20.000 * | 1.730 |
High resolution limit [Å] | 1.700 | 1.700 |
Rmerge | 0.045 | 0.034 * |
Total number of observations | 419758 * | |
Number of reflections | 28922 * | |
<I/σ(I)> | 10.2 | 4.2 |
Completeness [%] | 99.1 * | 97.9 |
Redundancy | 6.6 | 2.5 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 * | 298 | 20mM Sodium cacodylate, 1.4M Ammonium sulfate, 4mM Calcium chloride, 3% dioxane, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | sodium cacodylate | 10 (mM) | pH7.0 |
2 | 1 | drop | protein | 15 (mg/ml) | |
3 | 1 | reservoir | ammonium sulfate | 1.2 (M) | |
4 | 1 | reservoir | 1 (mM) | ||
5 | 1 | reservoir | dioxane | 3 (%) |