1F9J
STRUCTURE OF A NEW CRYSTAL FORM OF TETRAUBIQUITIN
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL7-1 |
Synchrotron site | SSRL |
Beamline | BL7-1 |
Temperature [K] | 90 |
Detector technology | IMAGE PLATE |
Collection date | 1997-03-01 |
Detector | MARRESEARCH |
Spacegroup name | I 41 2 2 |
Unit cell lengths | 97.020, 97.020, 88.970 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 19.920 - 2.700 |
R-factor | 0.224 * |
Rwork | 0.225 |
R-free | 0.29200 |
RMSD bond length | 0.008 |
RMSD bond angle | 1.400 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | AMoRE |
Refinement software | X-PLOR (3.843) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 19.920 | 2.870 |
High resolution limit [Å] | 2.700 | 2.700 |
Rmerge | 0.136 | 0.383 |
Total number of observations | 27007 * | |
Number of reflections | 5846 | |
<I/σ(I)> | 6 | |
Completeness [%] | 96.3 | 96.6 * |
Redundancy | 4.6 | 4.3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 4.5 | 293 | lithium sulfate, ammonium sulfate, sodium citrate, pH 4.5, VAPOR DIFFUSION, HANGING DROP, temperature 293.0K |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | protein | 15 (mg/ml) | |
10 | 1 | drop | peptide | 1 (mM) | |
2 | 1 | drop | ammonium acetate | 0.5 (mM) | |
3 | 1 | drop | EDTA | 0.001 (mM) | |
4 | 1 | drop | 5 (mg/ml) | ||
5 | 1 | drop | dithiothreitol | 1 (mM) | |
6 | 1 | reservoir | sodium citrate | 0.1 (M) | |
7 | 1 | reservoir | ammonium sulfate | 0.4 (M) | |
8 | 1 | reservoir | 1.05 (M) | ||
9 | 1 | drop | Ub4 | 0.44 (mM) |