1F2I
COCRYSTAL STRUCTURE OF SELECTED ZINC FINGER DIMER BOUND TO DNA
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU RU200 |
Temperature [K] | 125 |
Detector technology | IMAGE PLATE |
Collection date | 1999-05-23 |
Detector | RIGAKU RAXIS IV++ |
Spacegroup name | P 31 |
Unit cell lengths | 86.300, 86.300, 133.000 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 20.000 - 2.350 |
R-factor | 0.215 |
Rwork | 0.210 |
R-free | 0.25600 |
RMSD bond length | 0.007 |
RMSD bond angle | 1.100 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | DM |
Refinement software | X-PLOR (3.851) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 20.000 | 2.430 |
High resolution limit [Å] | 2.350 | 2.350 |
Rmerge | 0.081 | 0.345 |
Total number of observations | 191628 * | |
Number of reflections | 45805 | |
<I/σ(I)> | 15.5 | |
Completeness [%] | 99.9 | 99.8 |
Redundancy | 4.2 | 4 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.2 | 298 | PEG 4000, NaCl, MgCl2, MES, pH 6.2, VAPOR DIFFUSION, HANGING DROP at 298K |
1 | VAPOR DIFFUSION, HANGING DROP | 6.2 | 298 | PEG 4000, NaCl, MgCl2, MES, pH 6.2, VAPOR DIFFUSION, HANGING DROP at 298K |
Crystallization Reagents
ID | crystal ID | solution ID | reagent name | concentration | details |
1 | 1 | 1 | NaCl | ||
2 | 1 | 1 | MgCl2 | ||
3 | 1 | 1 | MES | ||
4 | 1 | 1 | PEG 4000 | ||
5 | 1 | 2 | PEG 4000 |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | protein | 1.1 (mM) | |
2 | 1 | drop | DNA | 1.5 (mM) | duplex |
3 | 1 | drop | 0.4 (M) | ||
4 | 1 | reservoir | PEG4000 | 13-20 (%(w/v)) | |
5 | 1 | reservoir | 50-150 (mM) | ||
6 | 1 | reservoir | 10 (mM) | ||
7 | 1 | reservoir | MES | 50 (mM) | pH6.2 |