1EM0
COMPLEX OF D(CCTAGG) WITH TETRA-[N-METHYL-PYRIDYL] PORPHYRIN
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE BM14 |
Synchrotron site | ESRF |
Beamline | BM14 |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Detector | MARRESEARCH |
Spacegroup name | P 41 |
Unit cell lengths | 32.210, 32.210, 62.257 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 6.000 - 0.900 |
R-factor | 0.142 * |
Rwork | 0.152 |
R-free | 0.16100 * |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | CCP4 ((MAD PROGS)) |
Refinement software | SHELXL-97 |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 30.000 | 1.000 |
High resolution limit [Å] | 0.860 | 0.900 |
Rmerge | 0.021 | 0.124 |
Total number of observations | 336951 * | |
Number of reflections | 45197 | |
Completeness [%] | 93.0 | 70.3 |
Redundancy | 8 | 8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | Vapor diffusion * | 7 | 290 | 1.25UM DNA, 1.25UM NI-PORPHYRIN, 50UM MGCL2, 5% MPD, 30MM SODIUM CACODYLATE, AGAINST 500UM RESERVOIR OF 55% MPD, pH 7.0, VAPOR DIFFUSION, SITTING DROP, temperature 290K |
1 | Vapor diffusion * | 7 | 290 | 1.25UM DNA, 1.25UM NI-PORPHYRIN, 50UM MGCL2, 5% MPD, 30MM SODIUM CACODYLATE, AGAINST 500UM RESERVOIR OF 55% MPD, pH 7.0, VAPOR DIFFUSION, SITTING DROP, temperature 290K |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | DNA | 1.25 (mM) | |
2 | 1 | drop | Ni2+-TMPy | 1.25 (mM) | |
3 | 1 | drop | 50 (mM) | ||
4 | 1 | drop | MPD | 5 (%) | |
5 | 1 | drop | sodium cacodylate | 30 (mM) | |
6 | 1 | reservoir | MPD | 55 (%) |