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1EM0

COMPLEX OF D(CCTAGG) WITH TETRA-[N-METHYL-PYRIDYL] PORPHYRIN

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE BM14
Synchrotron siteESRF
BeamlineBM14
Temperature [K]100
Detector technologyIMAGE PLATE
DetectorMARRESEARCH
Spacegroup nameP 41
Unit cell lengths32.210, 32.210, 62.257
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution6.000 - 0.900
R-factor0.142

*

Rwork0.152
R-free0.16100

*

Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareCCP4 ((MAD PROGS))
Refinement softwareSHELXL-97
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]30.0001.000
High resolution limit [Å]0.8600.900
Rmerge0.0210.124
Total number of observations336951

*

Number of reflections45197
Completeness [%]93.070.3
Redundancy88
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1Vapor diffusion

*

72901.25UM DNA, 1.25UM NI-PORPHYRIN, 50UM MGCL2, 5% MPD, 30MM SODIUM CACODYLATE, AGAINST 500UM RESERVOIR OF 55% MPD, pH 7.0, VAPOR DIFFUSION, SITTING DROP, temperature 290K
1Vapor diffusion

*

72901.25UM DNA, 1.25UM NI-PORPHYRIN, 50UM MGCL2, 5% MPD, 30MM SODIUM CACODYLATE, AGAINST 500UM RESERVOIR OF 55% MPD, pH 7.0, VAPOR DIFFUSION, SITTING DROP, temperature 290K
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropDNA1.25 (mM)
21dropNi2+-TMPy1.25 (mM)
31drop50 (mM)
41dropMPD5 (%)
51dropsodium cacodylate30 (mM)
61reservoirMPD55 (%)

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PDB entries from 2024-05-15

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