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1EDH

E-CADHERIN DOMAINS 1 AND 2 IN COMPLEX WITH CALCIUM

Experimental procedure
Source typeSYNCHROTRON
Source detailsCHESS BEAMLINE A1
Synchrotron siteCHESS
BeamlineA1
Temperature [K]113
Detector technologyCCD
Collection date1995-04-03
DetectorPRINCETON 2K
Spacegroup nameC 1 2 1
Unit cell lengths121.657, 80.802, 72.635
Unit cell angles90.00, 116.65, 90.00
Refinement procedure
Resolution5.000 - 2.000
R-factor0.206
Rwork0.206
R-free0.26200
Structure solution methodTHE INITIAL MODEL WAS OBTAINED FROM A COMBINATION OF MULTI-WAVELENGTH ANOMALOUS DIFFRACTION (MAD) AND REAL SPACE AVERAGING TECHNIQUES. THE MAD DATA WAS TAKEN AT THE MERCURY L(III) EDGE AT 3 DIFFERENT WAVELENGTHS (CHESS BEAMLINE F2). REAL SPACE AVERAGING WAS USED TO IMPROVE THE MAPS.
RMSD bond length0.006
RMSD bond angle26.966

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Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwarePHASES
Refinement softwareX-PLOR (3.1)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]22.0002.070
High resolution limit [Å]2.0002.000
Rmerge0.053

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Total number of observations86202

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Number of reflections37605
<I/σ(I)>13
Completeness [%]88.363.6
Redundancy2.31.59
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1Vapor diffusion

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7.25

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1.2 M AMMONIUM SULFATE 0.01 M CALCIUM CHLORIDE 0.1 M TRIS-HCL BUFFER, PH 9.0 0.003 M SODIUM AZIDE
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropprotein11 (mg/ml)
21dropTris-HCl20 (mM)
31dropdithiothreitol5 (mM)
41dropsodium azide0.05 (mM)
51reservoirammonium sulfate1.2 (M)
61reservoircalcium chloride5-10 (mM)
71reservoirTris-HCl100 (mM)
81reservoirsodium azide3 (mM)

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