1DXO
Crystal structure of human NAD[P]H-QUINONE oxidoreductase CO with 2,3,5,6,tetramethyl-P-benzoquinone (duroquinone) at 2.5 Angstrom resolution
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU RUH3R |
Temperature [K] | 100 |
Spacegroup name | P 1 |
Unit cell lengths | 55.579, 56.912, 97.755 |
Unit cell angles | 76.24, 76.73, 86.33 |
Refinement procedure
Resolution | 27.660 - 2.500 |
R-factor | 0.202 |
Rwork | 0.202 |
R-free | 0.26400 |
Structure solution method | OTHER |
RMSD bond length | 0.010 |
RMSD bond angle | 21.900 * |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | CNS (0.9) |
Refinement software | CNS (0.9) |
Data quality characteristics
Overall | |
Low resolution limit [Å] | 27.660 |
High resolution limit [Å] | 2.500 |
Rmerge | 0.044 * |
Number of reflections | 36969 |
Completeness [%] | 93.8 |
Redundancy | 2.5 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | Vapor diffusion, hanging drop * | 8 * | 25 * | pH 8.50 |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | protein | 10-15 (mg/ml) | |
2 | 1 | drop | Tris-HCl | 25 (mM) | |
3 | 1 | drop | FAD | 0.005 (mM) | |
4 | 1 | reservoir | PEG3350 | 30 (%) | |
5 | 1 | reservoir | sodium acetate | 200 (mM) | |
6 | 1 | reservoir | sodium tricine | 100 (mg/ml) | |
7 | 1 | reservoir | FAD | 0.012-0.024 (mM) | |
8 | 1 | reservoir | duroquinone | 8.9 (mM) | |
9 | 1 | reservoir | NADH | 0.025 (mM) |