1DI2
CRYSTAL STRUCTURE OF A DSRNA-BINDING DOMAIN COMPLEXED WITH DSRNA: MOLECULAR BASIS OF DOUBLE-STRANDED RNA-PROTEIN INTERACTIONS
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | ROTATING ANODE |
| Source details | RIGAKU RU200 |
| Temperature [K] | 113 |
| Detector technology | IMAGE PLATE |
| Collection date | 1996-01-25 |
| Detector | RIGAKU RAXIS IIC |
| Spacegroup name | C 1 2 1 |
| Unit cell lengths | 110.400, 58.500, 58.900 |
| Unit cell angles | 90.00, 105.20, 90.00 |
Refinement procedure
| Resolution | 15.000 - 1.900 |
| R-factor | 0.231 |
| Rwork | 0.228 |
| R-free | 0.25800 |
| Structure solution method | SIR |
| RMSD bond length | 0.006 |
| RMSD bond angle | 15.900 * |
| Data reduction software | DENZO |
| Data scaling software | SCALEPACK |
| Phasing software | MLPHARE |
| Refinement software | CNS |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 99.000 | 1.960 |
| High resolution limit [Å] | 1.890 | 1.890 |
| Rmerge | 0.063 | 0.287 |
| Number of reflections | 26083 | |
| <I/σ(I)> | 10 | 2.5 |
| Completeness [%] | 90.8 | 50 |
| Redundancy | 2.4 | 1.66 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 5.4 | 298 | PEG 4000, ETHYLENE GLYCOL, KCL, NACL, MES, DTT, BETA-MERCAPTOETHANOL, pH 5.4, VAPOR DIFFUSION, HANGING DROP, temperature 298.0K |
Crystallization Reagents
| ID | crystal ID | solution ID | reagent name | concentration | details |
| 1 | 1 | 1 | KCL | ||
| 2 | 1 | 1 | NACL | ||
| 3 | 1 | 1 | MES | ||
| 4 | 1 | 1 | DTT | ||
| 5 | 1 | 1 | BETA-MERCAPTOETHANOL | ||
| 6 | 1 | 1 | ETHYLENE GLYCOL | ||
| 7 | 1 | 1 | PEG 4000 | ||
| 8 | 1 | 2 | ETHYLENE GLYCOL | ||
| 9 | 1 | 2 | PEG 4000 |
Crystallization Reagents in Literatures
| ID | crystal ID | solution | reagent name | concentration (unit) | details |
| 1 | 1 | drop | Xlrbpa-2 | 0.7 (mM) | |
| 2 | 1 | drop | r(GGCGCGCGCC) | 0.7 (mM) | |
| 3 | 1 | reservoir | 225 (mM) | ||
| 4 | 1 | reservoir | 50 (mM) | ||
| 5 | 1 | reservoir | PEG4000 | 1 (%) | |
| 6 | 1 | reservoir | ehthylene glycol | 12 (%) | |
| 7 | 1 | reservoir | MES | 100 (mM) | |
| 8 | 1 | reservoir | dithiothreitol | 10 (mM) | |
| 9 | 1 | reservoir | beta-mercaptoethanol | 10 (mM) |






