1DF5
INTERACTIONS BETWEEN HIV-1 GP41 CORE AND DETERGENTS AND THEIR IMPLICATIONS FOR MEMBRANE FUSION
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU RU200 |
Temperature [K] | 130 |
Detector technology | IMAGE PLATE |
Collection date | 1998-03-19 |
Detector | RIGAKU RAXIS IV |
Spacegroup name | I 21 3 |
Unit cell lengths | 72.770, 72.770, 72.770 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 8.000 - 2.700 |
Rwork | 0.183 |
R-free | 0.31500 |
RMSD bond length | 0.004 |
RMSD bond angle | 23.700 * |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | AMoRE |
Refinement software | X-PLOR (3.1) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 30.000 | 2.800 |
High resolution limit [Å] | 2.700 | 2.700 |
Rmerge | 0.046 | 0.102 |
Total number of observations | 10354 * | |
Number of reflections | 1859 | |
<I/σ(I)> | 21 | |
Completeness [%] | 99.9 | 100 |
Redundancy | 5.6 | 5.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 293 | Potassium sodium tartrate, SDS, sodium hepes, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | protein | 10 (mg/ml) | |
2 | 1 | reservoir | sodium HEPES | 0.1 (M) | |
3 | 1 | reservoir | potassium sodium tartrate | 0.8 (M) | |
4 | 1 | reservoir | SDS | 10 (mM) |