1D7Y
CRYSTAL STRUCTURE OF NADH-DEPENDENT FERREDOXIN REDUCTASE, BPHA4
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PHOTON FACTORY BEAMLINE BL-18B |
Synchrotron site | Photon Factory |
Beamline | BL-18B |
Temperature [K] | 288 |
Detector technology | DIFFRACTOMETER |
Collection date | 1998-05-17 |
Detector | WEISSENBERG |
Spacegroup name | P 61 2 2 |
Unit cell lengths | 99.200, 99.200, 175.000 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 40.000 - 2.100 |
R-factor | 0.188 |
Rwork | 0.183 |
R-free | 0.25800 * |
RMSD bond length | 0.007 |
RMSD bond angle | 1.400 * |
Data reduction software | DENZO |
Data scaling software | CCP4 ((SCALA)) |
Phasing software | MLPHARE |
Refinement software | X-PLOR (3.851) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 40.000 | 2.210 |
High resolution limit [Å] | 2.100 | 2.100 |
Rmerge | 0.037 | 0.207 |
Total number of observations | 200297 * | |
Number of reflections | 30466 * | |
<I/σ(I)> | 18.8 | |
Completeness [%] | 100.0 * | 99.9 |
Redundancy | 6.6 | 5.1 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.4 * | 20 * | Yamada, T., (2000) Protein Pept.Lett., 7, 277. * |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | protein | 14.0 (mg/ml) | |
2 | 1 | reservoir | sodium formate | 2.0 (M) | |
3 | 1 | reservoir | sodium acetate | 100 (mM) |