Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1D5B

UNLIGANDED MATURE OXY-COPE CATALYTIC ANTIBODY

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRL BEAMLINE BL7-1
Synchrotron siteSSRL
BeamlineBL7-1
Temperature [K]200
Detector technologyIMAGE PLATE
Collection date1999-02-04
DetectorMARRESEARCH
Spacegroup nameP 21 21 21
Unit cell lengths77.420, 80.670, 134.750
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution20.000 - 2.800
R-factor0.232
Rwork0.232
R-free0.28500
RMSD bond length0.010

*

RMSD bond angle26.400

*

Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareAMoRE
Refinement softwareCNS (0.4)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]20.0002.900
High resolution limit [Å]2.8002.800
Rmerge0.0800.280
Total number of observations103369

*

Number of reflections19606

*

<I/σ(I)>22
Completeness [%]91.2

*

70.5
Redundancy53
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP8

*

29825%PEG 1000, 100mM sodium acetate, 300mM CdCl2, 100mM ammonium sulfate, pH 4.6, VAPOR DIFFUSION, HANGING DROP, temperature 298K
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropprotein10 (mg/ml)
21drop100 (mM)
31dropTris-HCl10 (mM)
41dropmethionine1 (mM)
51reservoirPEG100025 (%)
61reservoirsodium acetate100 (mM)
71reservoircadmium chloride300 (mM)
81reservoirammonium sulfate100 (mM)

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon