Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

1D43

DNA DODECAMER C-G-C-G-A-A-T-T-C-G-C-G/HOECHST 33258 COMPLEX: 0 DEGREES C, PIPERAZINE UP

Experimental procedure
Source typeROTATING ANODE
Temperature [K]273
Detector technologyDIFFRACTOMETER
DetectorRIGAKU AFC-5R
Spacegroup nameP 21 21 21
Unit cell lengths23.950, 38.990, 65.180
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution8.000 - 2.000
R-factor0.157
Refinement softwareNUCLSQ
Data quality characteristics
 Overall
Low resolution limit [Å]8.000

*

High resolution limit [Å]2.000

*

Rmerge0.178

*

Number of reflections2540

*

Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP6.94

*

pH 6.90, VAPOR DIFFUSION, SITTING DROP, temperature 277.00K
Crystallization Reagents
IDcrystal IDsolution IDreagent nameconcentrationdetails
111WATER
211MPD
311MG ACETATE
411SPERMINE_HCL
512WATER
612MPD
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropDNA0.22 (mM)
21dropHoechest 332580.44 (mM)
31drop5.0 (mM)
41dropspermine-HCl0.5 (mM)
51dropMPD15 (%(v/v))
61reservoir32.5 (%(v/v))

229380

PDB entries from 2024-12-25

PDB statisticsPDBj update infoContact PDBjnumon