Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

1CP2

NITROGENASE IRON PROTEIN FROM CLOSTRIDIUM PASTEURIANUM

Experimental procedure
Source typeROTATING ANODE
Source detailsRIGAKU
Temperature [K]113
Detector technologyIMAGE PLATE
Collection date1993-11
DetectorRIGAKU RAXIS IIC
Spacegroup nameP 1 21 1
Unit cell lengths67.600, 75.870, 53.550
Unit cell angles90.00, 114.17, 90.00
Refinement procedure
Resolution5.000 - 1.930
R-factor0.209
Rwork0.209
R-free0.29700
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1nip
RMSD bond length0.018
RMSD bond angle24.100

*

Data reduction softwareR-AXIS (IIC)
Data scaling softwareREFSTAT
Phasing softwareX-PLOR (3.1)
Refinement softwareX-PLOR (3.1)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]15.6302.000
High resolution limit [Å]1.9301.930
Rmerge0.072
Total number of observations250737

*

Number of reflections36808
<I/σ(I)>5.8
Completeness [%]98.891
Redundancy6.8
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1Batch method

*

7.5PROTEIN WAS CRYSTALLIZED BY LIQUID-LIQUID DIFFUSION METHOD. PRECIPITANT CONTAINED 5-15% GLYCEROL, 18.75-22.5% PEG 4000, 230-270 MM CACL2, AND 50 MM HEPES PH 7.5. PROTEIN WAS STORED BEFORE CRYSTALLIZATION IN 20% GLYCEROL, 50 MM HEPES, PH 7.5, AND 2 MM NA2S2O4., liquid - liquid diffusion
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
111glycerol5-15 (%)
211PEG400018.75-22.5 (%)
311230-270 (mM)
411HEPES50 (mM)
512glycerol20 (%)
6122 (mM)
712HEPES50 (mM)

229380

PDB entries from 2024-12-25

PDB statisticsPDBj update infoContact PDBjnumon