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1C1U

RECRUITING ZINC TO MEDIATE POTENT, SPECIFIC INHIBITION OF SERINE PROTEASES

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Temperature [K]298
Detector technologyIMAGE PLATE
Collection date1998-01-23
DetectorRIGAKU RAXIS IV++
Spacegroup nameC 1 2 1
Unit cell lengths71.680, 72.120, 73.110
Unit cell angles90.00, 101.62, 90.00
Refinement procedure
Resolution7.500 - 1.750
R-factor0.206
Rwork0.206
R-free0.23500
Structure solution methodDIFFERENCE FOURIER PLUS REFINEMENT
RMSD bond length0.018
RMSD bond angle4.100
Data reduction softwarebioteX ((MSC))
Data scaling softwarebioteX
Phasing softwareX-PLOR
Refinement softwareX-PLOR (3.1)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]38.7801.830
High resolution limit [Å]1.4501.750
Rmerge0.0850.250
Number of reflections35066
<I/σ(I)>7.81.8
Completeness [%]77.050
Redundancy1.9
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1unknown

*

8.2THROMBIN WAS PURCHASED FROM HAEMATOLOGIC TECHNOLOGIES, INC. AND ACETYL-HIRUDIN FROM BACHEM. THROMBIN WAS PREPARED AS DESCRIBED (SKRZPCZAK-JANKUN ET AL., 1991) .THROMBIN (1.0 MG/ML IN 50 MM HEPES, 50 % GLYCEROL, PH 7.0) WAS INCUBATED WITH 1.0 MM ACETYL-HIRUDIN, 1.0 MM HEMI-BABIM, 1.0 MM ZN+2 FOR 1 HR AT 4 DEG C. GLYCEROL WAS REMOVED AND THE COMPLEX CONCENTRATED WITH A CENTRICON 10 ( AMICON) TO 8.6 MG/ML AS DETERMINED BY THE BIORAD PROTEIN ASSAY KIT USING BOVINE SERUM ALBUMIN. CRYSTALS OF THROMBIN-ACETYL-HIRUDIN-HEMI-BABIM-ZN+2 WERE GROWN IN HANGING DROPS BY VAPOR DIFFUSION AFTER STREAK SEEDING. THE DROPS WERE MADE FROM 5 MICROLITERS OF COMPLEX AND 5 MICROLITERS OF RESERVOIR SOLUTION ( 0.10 M TRIS,0.50 M NACL, 22 % (BY VOLUME) PEG 4K, PH 8.20).

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