1C0M
CRYSTAL STRUCTURE OF RSV TWO-DOMAIN INTEGRASE
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSLS BEAMLINE X9B |
Synchrotron site | NSLS |
Beamline | X9B |
Temperature [K] | 95 |
Detector technology | IMAGE PLATE |
Detector | MARRESEARCH |
Spacegroup name | P 1 |
Unit cell lengths | 55.752, 66.369, 76.670 |
Unit cell angles | 67.47, 78.61, 90.18 |
Refinement procedure
Resolution | 15.000 - 2.530 |
R-factor | 0.216 |
Rwork | 0.216 |
R-free | 0.27900 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | A POLYALANINE 1C1A INITIAL MODEL BUILT FROM 3.2A MAD PHASED MAP WITHOUT RESIDUES 200-220 |
RMSD bond length | 0.007 |
RMSD bond angle | 23.000 * |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | AMoRE |
Refinement software | X-PLOR (3.851) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 15.000 | 2.620 |
High resolution limit [Å] | 2.530 | 2.530 |
Rmerge | 0.036 | 0.096 |
Number of reflections | 28842 | |
<I/σ(I)> | 18.3 | 5.4 |
Completeness [%] | 87.6 | 75.7 |
Redundancy | 1.8 | 1.6 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | Vapor diffusion, hanging drop * | 7 | 277 | PLATE-SHAPED CRYSTALS WERE INFREQUENTLY GROWN BY HANGING DROP VAPOR DIFFUSION METHOD. RESERVOIR SOLUTION CONTAINED 0.050M KCL, 0.01M MGCL2, 0.05M SODIUM CACODYLATE, PH 7.0, 10% PEG 3350, and 20% (V/V) ETHYLENE GLYCOL. THE DROP CONTAINED 1:1 MIXTURE OF RESERVOIR SOLUTION AND PROTEIN (10-15 MG/ML), HANGING DROP VAPOR DIFFUSION METHOD, temperature 277K |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | reservoir | 0.05 (M) | ||
2 | 1 | reservoir | 0.01 (M) | ||
3 | 1 | reservoir | sodium cacodylate | 0.05 (M) | |
4 | 1 | reservoir | PEG3350 | 10 (%(w/v)) | |
5 | 1 | reservoir | ethylene glycol | 25 (%(v/v)) |