1BRR
X-RAY STRUCTURE OF THE BACTERIORHODOPSIN TRIMER/LIPID COMPLEX
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | EMBL/DESY, HAMBURG BEAMLINE X11 |
Synchrotron site | EMBL/DESY, HAMBURG |
Beamline | X11 |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 1997-07-15 |
Detector | MARRESEARCH |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 120.520, 105.960, 80.190 |
Unit cell angles | 90.00, 94.94, 90.00 |
Refinement procedure
Resolution | 10.000 - 2.900 |
R-factor | 0.256 |
Rwork | 0.256 |
R-free | 0.29900 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2brd |
RMSD bond length | 0.009 |
RMSD bond angle | 19.430 * |
Data reduction software | DENZO |
Data scaling software | CCP4 ((SCALA)) |
Phasing software | X-PLOR |
Refinement software | X-PLOR (3.851) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 25.000 | 3.030 |
High resolution limit [Å] | 2.900 | 2.900 |
Rmerge | 0.078 | 0.215 |
Total number of observations | 48145 * | |
Number of reflections | 18504 | |
<I/σ(I)> | 10.2 | 5.7 |
Completeness [%] | 82.3 | 43.6 |
Redundancy | 2.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | Vapor diffusion * | 5.2 | 4 * | SEE REFERENCE 2, pH 5.2 |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | protein | 9-11.5 (mg/ml) | |
2 | 1 | drop | beta-octylglucopyranoside | 0.25 (%(w/v)) | |
3 | 1 | drop | benzamidine | 2 (%(w/v)) | |
4 | 1 | drop | sodium phosphate | 250 (mM) | |
5 | 1 | drop | sodium phosphate | 1.5 (M) | |
6 | 1 | reservoir | ammonium sulfate | 1.8-2.3 (M) |