1AVG
THROMBIN INHIBITOR FROM TRIATOMA PALLIDIPENNIS
Experimental procedure
Source type | ROTATING ANODE |
Source details | RIGAKU RUH2R |
Temperature [K] | 280 |
Detector technology | IMAGE PLATE |
Collection date | 1996-06 |
Detector | MARRESEARCH |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 44.840, 67.230, 183.490 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 10.000 - 2.600 |
R-factor | 0.184 |
Rwork | 0.184 |
R-free | 0.27500 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | BOVINE THROMBIN |
RMSD bond length | 0.008 |
RMSD bond angle | 25.920 * |
Data reduction software | MOSFLM |
Data scaling software | CCP4 ((AGROVATA) |
Phasing software | AMoRE |
Refinement software | X-PLOR (3.842) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 19.920 | 2.670 |
High resolution limit [Å] | 2.600 | 2.600 |
Rmerge | 0.099 | 0.121 |
Total number of observations | 79890 * | |
Number of reflections | 16392 | |
<I/σ(I)> | 14.22 | 2.65 |
Completeness [%] | 93.2 | 81.6 |
Redundancy | 4.5 | 1.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | Vapor diffusion, sitting drop * | 4.6 | 20 * | 50 MM NA ACETATE, PH 4.6, 100 MM (NH4)2SO4, 16 % PEG 4,000 |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | protein | 2.5 (mg/ml) | |
2 | 1 | drop | Na acetate | 50 (mM) | |
3 | 1 | drop | ammonium sulfate | 100 (mM) | |
4 | 1 | drop | 0.01 (%) | ||
5 | 1 | drop | PEG4000 | 8 (%) | |
6 | 1 | reservoir | PEG4000 | 16 (%) |