Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

1AGB

ANTAGONIST HIV-1 GAG PEPTIDES INDUCE STRUCTURAL CHANGES IN HLA B8-HIV-1 GAG PEPTIDE (GGRKKYKL-3R MUTATION)

Experimental procedure
Source typeSYNCHROTRON
Source detailsSRS BEAMLINE PX9.6
Synchrotron siteSRS
BeamlinePX9.6
Temperature [K]187
Detector technologyIMAGE PLATE
Collection date1996-09-02
DetectorMARRESEARCH
Spacegroup nameP 21 21 21
Unit cell lengths51.000, 81.600, 111.600
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution14.000 - 2.200
Rwork0.195
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)HLA B27
RMSD bond length0.012
RMSD bond angle1.600
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareX-PLOR
Refinement softwarePROLSQ
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]14.0002.300
High resolution limit [Å]2.2002.200
Rmerge0.0890.232
Total number of observations88881

*

Number of reflections27424
<I/σ(I)>8.5
Completeness [%]97.791.5
Redundancy3.2
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1Vapor diffusion, sitting drop

*

8

*

21

*

Reid, S.W., (1996) Febs Lett., 383, 119.

*

Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropprotein10 (mg/ml)
21dropTris20 (mM)
31reservoirPEG400030 (%)
41reservoirsodium citrate0.1 (M)
51reservoirammonium acetate0.03 (M)

229380

PDB entries from 2024-12-25

PDB statisticsPDBj update infoContact PDBjnumon