1AD5
SRC FAMILY KINASE HCK-AMP-PNP COMPLEX
Experimental procedure
Source type | ROTATING ANODE |
Source details | RIGAKU RUH2R |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 1996-11 |
Detector | RIGAKU |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 72.767, 92.360, 178.290 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 18.000 - 2.600 |
R-factor | 0.239 |
Rwork | 0.239 |
R-free | 0.30700 |
Structure solution method | MIRAS/MAD |
RMSD bond length | 0.016 |
RMSD bond angle | 3.200 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | PHASES |
Refinement software | X-PLOR (3.8) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 18.000 | 2.700 |
High resolution limit [Å] | 2.600 | 2.600 |
Rmerge | 0.053 | 0.189 |
Total number of observations | 346924 * | |
Number of reflections | 34027 | |
<I/σ(I)> | 12 | 3 |
Completeness [%] | 96.8 | 92.8 |
Redundancy | 10.2 | 10.2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | Vapor diffusion, hanging drop * | 6.5 | 292 | HANGING DROPS (1UL) OF 50MG/ML PROTEIN AND 10MM AMP-PNP WERE MIXED WITH EQUAL VOLUMES OF RESERVOIR BUFFER CONTAINING 150 MM CALCIUM ACETATE, 100MM CACODYLATE (PH 6.5), 7% PEG 8000 AND 16% V/V ETHYLENE GLYCOL. THE MIXED DROPS WERE THEN SEEDED AND STORED AT 19 DEGREES C., vapor diffusion - hanging drop and seeding, temperature 292K |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | protein | 25 (mg/ml) | |
10 | 1 | reservoir | ethylene glycol | 16 (%(v/v)) | |
2 | 1 | drop | quercetin | 5 (mM) | can be replaced by 2AMP-PMP |
3 | 1 | drop | calcium acetate | 75 (mM) | |
4 | 1 | drop | cacodylate | 50 (mM) | |
5 | 1 | drop | PEG8000 | 3.5 (%(w/v)) | |
6 | 1 | drop | ethylene glycol | 8 (%(v/v)) | |
7 | 1 | reservoir | calcium acetate | 150 (mM) | |
8 | 1 | reservoir | cacodylate | 100 (mM) | |
9 | 1 | reservoir | PEG8000 | 7 (%(w/v)) |