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10OS

Structure of the apo form of the Roseobacterial MED193 sp. GapR protein

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALS BEAMLINE 5.0.2
Synchrotron siteALS
Beamline5.0.2
Temperature [K]100
Detector technologyPIXEL
Collection date2020-03-12
DetectorDECTRIS PILATUS3 6M
Wavelength(s)1.0
Spacegroup nameP 41 21 2
Unit cell lengths57.193, 57.193, 169.482
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution39.340 - 2.980
R-factor0.2318
Rwork0.227
R-free0.27310
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.007
RMSD bond angle0.910
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHENIX
Refinement softwarePHENIX ((1.20.1_4487: ???))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]39.3403.280
High resolution limit [Å]2.9402.940
Rmerge0.0451.016
Rpim0.0210.597
Number of reflections62381347
<I/σ(I)>22.71.9
Completeness [%]98.1
Redundancy9.3
CC(1/2)0.9980.886
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP2930.1 M 4-(2-hydroxyethyl)piperazin-1-yl]ethanesulfonic acid (HEPES) pH 7.5 and 25% (w/v) PEG 6000

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PDB entries from 2026-11-04

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