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更新された PDB エントリー
8D9G
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BU of 8d9g by Molmil
gRAMP-TPR-CHAT Non match PFS target RNA(Craspase)
分子名称: CHAT domain protein, RAMP superfamily protein, RNA (36-MER), ...
著者Hu, C, Nam, K.H, Schuler, G, Ke, A.
登録日2022-06-09
公開日2023-06-14
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (2.57 Å)
主引用文献Craspase is a CRISPR RNA-guided, RNA-activated protease.
Science, 377, 2022
8D9H
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BU of 8d9h by Molmil
gRAMP-TPR-CHAT match PFS target RNA(Craspase)
分子名称: CHAT domain protein, PHOSPHATE ION, RAMP superfamily protein, ...
著者Hu, C, Nam, K.H, Schuler, G, Ke, A.
登録日2022-06-09
公開日2023-06-14
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Craspase is a CRISPR RNA-guided, RNA-activated protease.
Science, 377, 2022
8D9K
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BU of 8d9k by Molmil
CryoEM structure of human METTL1-WDR4 in complex with Lys-tRNA
分子名称: RNA (65-MER), tRNA (guanine-N(7)-)-methyltransferase, tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit WDR4
著者Ruiz-Arroyo, V.M, Nam, Y.
登録日2022-06-10
公開日2023-01-11
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.72 Å)
主引用文献Structures and mechanisms of tRNA methylation by METTL1-WDR4.
Nature, 613, 2023
8D9L
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BU of 8d9l by Molmil
CryoEM structure of human METTL1-WDR4 in complex with Lys-tRNA and SAM
分子名称: Lys-tRNA, S-ADENOSYLMETHIONINE, tRNA (guanine-N(7)-)-methyltransferase, ...
著者Ruiz-Arroyo, V.M, Nam, Y.
登録日2022-06-10
公開日2023-01-11
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (4.04 Å)
主引用文献Structures and mechanisms of tRNA methylation by METTL1-WDR4.
Nature, 613, 2023
8D9N
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BU of 8d9n by Molmil
CryoEM structures of bAE1 captured in multiple states.
分子名称: Anion exchange protein
著者Zhekova, H.R, Wang, W.G, Jiang, J.S, Tsirulnikov, K, Muhammad-Khan, G.H, Azimov, R, Abuladze, N, Kao, L, Newman, D, Noskov, S.Y, Tieleman, P, Zhou, Z.H, Pushkin, A, Kurtz, I.
登録日2022-06-10
公開日2023-01-25
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (4.4 Å)
主引用文献CryoEM structures of anion exchanger 1 capture multiple states of inward- and outward-facing conformations.
Commun Biol, 5, 2022
8D9R
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BU of 8d9r by Molmil
AP-1, Arf1, Nef lattice on MHC-I lipopeptide incorporated wide membrane tubes, centered on gamma-Arf1
分子名称: ADP-ribosylation factor 1, AP-1 complex subunit beta-1, AP-1 complex subunit gamma-1, ...
著者Hooy, R.M, Hurley, J.H.
登録日2022-06-11
公開日2022-11-09
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (20 Å)
主引用文献Self-assembly and structure of a clathrin-independent AP-1:Arf1 tubular membrane coat.
Sci Adv, 8, 2022
8D9S
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BU of 8d9s by Molmil
AP-1, Arf1, Nef lattice on MHC-I lipopeptide incorporated wide membrane tubes, centered on beta-Arf1
分子名称: ADP ribosylation factor 1, AP-1 complex subunit beta-1, AP-1 complex subunit gamma-1, ...
著者Hooy, R.M, Hurley, J.H.
登録日2022-06-11
公開日2022-11-09
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (20 Å)
主引用文献Self-assembly and structure of a clathrin-independent AP-1:Arf1 tubular membrane coat.
Sci Adv, 8, 2022
8D9T
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BU of 8d9t by Molmil
AP-1, Arf1, Nef lattice on MHC-I lipopeptide incorporated narrow membrane tubes, centered on gamma-Arf1
分子名称: ADP ribosylation factor 1, AP-1 complex subunit beta-1, AP-1 complex subunit gamma-1, ...
著者Hooy, R.M, Hurley, J.H.
登録日2022-06-11
公開日2022-11-09
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (20 Å)
主引用文献Self-assembly and structure of a clathrin-independent AP-1:Arf1 tubular membrane coat.
Sci Adv, 8, 2022
8D9U
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BU of 8d9u by Molmil
AP-1, Arf1, Nef lattice on MHC-I lipopeptide incorporated narrow membrane tubes, centered on beta-Arf1
分子名称: ADP-ribosylation factor 1, AP-1 complex subunit beta-1, AP-1 complex subunit gamma-1, ...
著者Hooy, R.M, Hurley, J.H.
登録日2022-06-11
公開日2022-11-09
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (20 Å)
主引用文献Self-assembly and structure of a clathrin-independent AP-1:Arf1 tubular membrane coat.
Sci Adv, 8, 2022
8D9V
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BU of 8d9v by Molmil
gamma-Arf1 homodimeric interface within AP-1, Arf1, Nef lattice on narrow membrane tubes
分子名称: ADP ribosylation factor 1, AP-1 complex subunit beta-1, AP-1 complex subunit gamma-1, ...
著者Hooy, R.M, Hurley, J.H.
登録日2022-06-11
公開日2022-11-09
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (9.4 Å)
主引用文献Self-assembly and structure of a clathrin-independent AP-1:Arf1 tubular membrane coat.
Sci Adv, 8, 2022
8D9W
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BU of 8d9w by Molmil
beta-Arf1 homodimeric interface within AP-1, Arf1, Nef, MHC-I lattice on narrow tubes
分子名称: ADP-ribosylation factor 1, AP-1 complex subunit beta-1, AP-1 complex subunit gamma-1, ...
著者Hooy, R.H, Hurley, J.H.
登録日2022-06-11
公開日2023-07-05
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (9.3 Å)
主引用文献Self-assembly and structure of a clathrin-independent AP-1:Arf1 tubular membrane coat.
Sci Adv, 8, 2022
8DAR
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BU of 8dar by Molmil
Saccharomyces cerevisiae Ufd1/Npl4/Cdc48 complex unbound but in the presence of SUMO-ubiquitin(K48polyUb)-mEOS and ATP
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Cell division control protein 48, ...
著者Lee, H.G, Lima, C.D.
登録日2022-06-14
公開日2022-11-30
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献SUMO enhances unfolding of SUMO-polyubiquitin-modified substrates by the Ufd1/Npl4/Cdc48 complex.
Proc.Natl.Acad.Sci.USA, 120, 2023
8DBC
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BU of 8dbc by Molmil
Human PRPS1 with Phosphate; Hexamer
分子名称: PHOSPHATE ION, Ribose-phosphate pyrophosphokinase 1
著者Hvorecny, K.L, Kollman, J.M.
登録日2022-06-14
公開日2023-02-15
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Human PRPS1 filaments stabilize allosteric sites to regulate activity.
Nat.Struct.Mol.Biol., 30, 2023
8DBD
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BU of 8dbd by Molmil
Human PRPS1 with Phosphate; Filament Interface
分子名称: PHOSPHATE ION, Ribose-phosphate pyrophosphokinase 1
著者Hvorecny, K.L, Kollman, J.M.
登録日2022-06-14
公開日2023-02-15
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Human PRPS1 filaments stabilize allosteric sites to regulate activity.
Nat.Struct.Mol.Biol., 30, 2023
8DBE
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BU of 8dbe by Molmil
Human PRPS1 with ADP; Hexamer
分子名称: 5-O-phosphono-alpha-D-ribofuranose, ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
著者Hvorecny, K.L, Kollman, J.M.
登録日2022-06-14
公開日2023-02-15
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (2.1 Å)
主引用文献Human PRPS1 filaments stabilize allosteric sites to regulate activity.
Nat.Struct.Mol.Biol., 30, 2023
8DBF
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BU of 8dbf by Molmil
Human PRPS1 with ADP; Filament Interface
分子名称: 5-O-phosphono-alpha-D-ribofuranose, ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
著者Hvorecny, K.L, Kollman, J.M.
登録日2022-06-14
公開日2023-02-15
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (2.2 Å)
主引用文献Human PRPS1 filaments stabilize allosteric sites to regulate activity.
Nat.Struct.Mol.Biol., 30, 2023
8DBG
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BU of 8dbg by Molmil
Human PRPS1 with Phosphate and ATP; Hexamer
分子名称: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, PHOSPHATE ION, ...
著者Hvorecny, K.L, Kollman, J.M.
登録日2022-06-14
公開日2023-02-15
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (2.2 Å)
主引用文献Human PRPS1 filaments stabilize allosteric sites to regulate activity.
Nat.Struct.Mol.Biol., 30, 2023
8DBH
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BU of 8dbh by Molmil
Human PRPS1 with Phosphate and ATP; Filament Interface
分子名称: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, PHOSPHATE ION, ...
著者Hvorecny, K.L, Kollman, J.M.
登録日2022-06-14
公開日2023-02-15
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (2.2 Å)
主引用文献Human PRPS1 filaments stabilize allosteric sites to regulate activity.
Nat.Struct.Mol.Biol., 30, 2023
8DBI
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BU of 8dbi by Molmil
Human PRPS1 with Phosphate, ATP, and R5P; Hexamer
分子名称: 5-O-phosphono-alpha-D-ribofuranose, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
著者Hvorecny, K.L, Kollman, J.M.
登録日2022-06-14
公開日2023-02-15
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (2 Å)
主引用文献Human PRPS1 filaments stabilize allosteric sites to regulate activity.
Nat.Struct.Mol.Biol., 30, 2023
8DBJ
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BU of 8dbj by Molmil
Human PRPS1 with Phosphate, ATP, and R5P; Filament Interface
分子名称: 5-O-phosphono-alpha-D-ribofuranose, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
著者Hvorecny, K.L, Kollman, J.M.
登録日2022-06-14
公開日2023-02-15
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (2 Å)
主引用文献Human PRPS1 filaments stabilize allosteric sites to regulate activity.
Nat.Struct.Mol.Biol., 30, 2023
8DBK
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BU of 8dbk by Molmil
Human PRPS1 with Phosphate, ATP, and R5P; Hexamer with resolved catalytic loops
分子名称: 1-O-pyrophosphono-5-O-phosphono-alpha-D-ribofuranose, 5-O-phosphono-alpha-D-ribofuranose, ADENOSINE MONOPHOSPHATE, ...
著者Hvorecny, K.L, Kollman, J.M.
登録日2022-06-14
公開日2023-02-15
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (2.1 Å)
主引用文献Human PRPS1 filaments stabilize allosteric sites to regulate activity.
Nat.Struct.Mol.Biol., 30, 2023
8DBL
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BU of 8dbl by Molmil
Human PRPS1 with Phosphate and PRPP; Hexamer
分子名称: 1-O-pyrophosphono-5-O-phosphono-alpha-D-ribofuranose, MAGNESIUM ION, PHOSPHATE ION, ...
著者Hvorecny, K.L, Kollman, J.M.
登録日2022-06-14
公開日2023-02-15
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (2.4 Å)
主引用文献Human PRPS1 filaments stabilize allosteric sites to regulate activity.
Nat.Struct.Mol.Biol., 30, 2023
8DBM
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BU of 8dbm by Molmil
Human PRPS1 with Phosphate and PRPP; Filament Interface
分子名称: 1-O-pyrophosphono-5-O-phosphono-alpha-D-ribofuranose, MAGNESIUM ION, PHOSPHATE ION, ...
著者Hvorecny, K.L, Kollman, J.M.
登録日2022-06-14
公開日2023-02-15
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (2.4 Å)
主引用文献Human PRPS1 filaments stabilize allosteric sites to regulate activity.
Nat.Struct.Mol.Biol., 30, 2023
8DBN
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BU of 8dbn by Molmil
Human PRPS1-E307A engineered mutation with Phosphate, ATP, and R5P; Hexamer
分子名称: 5-O-phosphono-alpha-D-ribofuranose, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
著者Hvorecny, K.L, Kollman, J.M.
登録日2022-06-14
公開日2023-02-15
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (2.4 Å)
主引用文献Human PRPS1 filaments stabilize allosteric sites to regulate activity.
Nat.Struct.Mol.Biol., 30, 2023
8DBO
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BU of 8dbo by Molmil
Human PRPS1-E307A engineered mutation with ADP; Hexamer
分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, PHOSPHATE ION, ...
著者Hvorecny, K.L, Kollman, J.M.
登録日2022-06-14
公開日2023-02-15
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (2.5 Å)
主引用文献Human PRPS1 filaments stabilize allosteric sites to regulate activity.
Nat.Struct.Mol.Biol., 30, 2023

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