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新しい PDB エントリー
8W33
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Structure of McrD (methyl-coenzyme M reductase operon protein D) from Methanomassiliicoccus luminyensis
分子名称: GLYCEROL, McrD (methyl-coenzyme M reductase operon protein D)
著者Sutherland-Smith, A.J, Carbone, V, Schofield, L.R, Ronimus, R.S.
登録日2024-02-21
公開日2024-07-03
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献The crystal structure of methanogen McrD, a methyl-coenzyme M reductase-associated protein.
Febs Open Bio, 2024
8W4G
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Crystal structure of EndoSz mutant D234M, from Streptococcus equi subsp. Zooepidemicus Sz105
分子名称: CALCIUM ION, glycoside hydrolase
著者Guan, H.H, Lin, C.C, Hsieh, Y.C, Chen, C.J.
登録日2023-08-24
公開日2024-07-03
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Structure-Based High-Efficiency Homogeneous Antibody Platform by Endoglycosidase Sz Provides Insights into Its Transglycosylation Mechanism
Jacs Au, 4, 2024
8W4I
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Crystal structure of EndoSz mutant D234M in space group P21
分子名称: CALCIUM ION, glycoside hydrolase
著者Guan, H.H, Lin, C.C, Hsieh, Y.C, Chen, C.J.
登録日2023-08-24
公開日2024-07-03
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structure-Based High-Efficiency Homogeneous Antibody Platform by Endoglycosidase Sz Provides Insights into Its Transglycosylation Mechanism
Jacs Au, 4, 2024
8W4L
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Crystal structure of closed conformation of human immunoglobulin Fc in presence of EndoSz
分子名称: CHLORIDE ION, Immunoglobulin gamma-1 heavy chain, N-acetyl-alpha-neuraminic acid-(2-6)-beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Guan, H.H, Lin, C.C, Hsieh, Y.C, Chen, C.J.
登録日2023-08-24
公開日2024-07-03
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Structure-Based High-Efficiency Homogeneous Antibody Platform by Endoglycosidase Sz Provides Insights into Its Transglycosylation Mechanism
Jacs Au, 4, 2024
8W4M
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Crystal structure of open conformation of human immunoglobulin Fc in presence of EndoSz
分子名称: Immunoglobulin gamma-1 heavy chain, ZINC ION, beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose
著者Guan, H.H, Lin, C.C, Hsieh, Y.C, Chen, C.J.
登録日2023-08-24
公開日2024-07-03
実験手法X-RAY DIFFRACTION (2.18 Å)
主引用文献Structure-Based High-Efficiency Homogeneous Antibody Platform by Endoglycosidase Sz Provides Insights into Its Transglycosylation Mechanism
Jacs Au, 4, 2024
8W4N
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Crystal structure of EndoSz mutant D234M, in space group P21, in complex with oligosaccharide G2S1
分子名称: CALCIUM ION, Glycoside hydrolase, N-acetyl-alpha-neuraminic acid-(2-6)-beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
著者Guan, H.H, Lin, C.C, Hsieh, Y.C, Chen, C.J.
登録日2023-08-24
公開日2024-07-03
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Structure-Based High-Efficiency Homogeneous Antibody Platform by Endoglycosidase Sz Provides Insights into Its Transglycosylation Mechanism
Jacs Au, 4, 2024
8WD0
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Crystal structure of T2R-TTL-Erianin complex
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 2-methoxy-5-[2-(3,4,5-trimethoxyphenyl)ethyl]phenol, CALCIUM ION, ...
著者Yang, J.
登録日2023-09-14
公開日2024-07-03
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献The cytotoxic natural compound erianin binds to colchicine site of beta-tubulin and overcomes taxane resistance
Bioorg.Chem., 150, 2024
8WHS
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Spike Trimer of BA.2.86 in complex with one hACE2
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, Processed angiotensin-converting enzyme 2, ...
著者Yue, C, Liu, P.
登録日2023-09-23
公開日2024-07-03
実験手法ELECTRON MICROSCOPY (3.33 Å)
主引用文献Spike N354 glycosylation augments SARS-CoV-2 fitness for human adaptation through structural plasticity
Natl Sci Rev, 2024
8WHU
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Spike Trimer of BA.2.86 in complex with two hACE2s
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, Processed angiotensin-converting enzyme 2, ...
著者Yue, C, Liu, P.
登録日2023-09-23
公開日2024-07-03
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Spike N354 glycosylation augments SARS-CoV-2 fitness for human adaptation through structural plasticity
Natl Sci Rev, 2024
8WHV
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Spike Trimer of BA.2.86 with three RBDs down
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
著者Yue, C, Liu, P.
登録日2023-09-23
公開日2024-07-03
実験手法ELECTRON MICROSCOPY (3.32 Å)
主引用文献Spike N354 glycosylation augments SARS-CoV-2 fitness for human adaptation through structural plasticity
Natl Sci Rev, 2024
8WHW
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Spike Trimer of BA.2.86 with single RBD up
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
著者Yue, C, Liu, P.
登録日2023-09-23
公開日2024-07-03
実験手法ELECTRON MICROSCOPY (3.85 Å)
主引用文献Spike N354 glycosylation augments SARS-CoV-2 fitness for human adaptation through structural plasticity
Natl Sci Rev, 2024
8WI0
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wt-hMRP5 inward-open
分子名称: ATP-binding cassette sub-family C member 5
著者Liu, Z.M, Huang, Y.
登録日2023-09-24
公開日2024-07-03
実験手法ELECTRON MICROSCOPY (2.93 Å)
主引用文献Inhibition and transport mechanisms of the ABC transporter hMRP5.
Nat Commun, 15, 2024
8WI2
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RD-hMRP5-inward open
分子名称: ATP-binding cassette sub-family C member 5, CYS-GLN-ASP-ALA-LEU-GLU-THR-ALA-ALA-ARG-ALA-GLU-GLY-LEU-SER-LEU-ASP-ALA-SER
著者Liu, Z.M, Huang, Y.
登録日2023-09-24
公開日2024-07-03
実験手法ELECTRON MICROSCOPY (4.06 Å)
主引用文献Inhibition and transport mechanisms of the ABC transporter hMRP5.
Nat Commun, 15, 2024
8WI3
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ND-hMRP5-inward open
分子名称: ATP-binding cassette sub-family C member 5
著者Liu, Z.M, Huang, Y.
登録日2023-09-24
公開日2024-07-03
実験手法ELECTRON MICROSCOPY (3.38 Å)
主引用文献Inhibition and transport mechanisms of the ABC transporter hMRP5.
Nat Commun, 15, 2024
8WI4
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m6-hMRP5 inward open
分子名称: ATP-binding cassette sub-family C member 5
著者Liu, Z.M, Huang, Y.
登録日2023-09-24
公開日2024-07-03
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Inhibition and transport mechanisms of the ABC transporter hMRP5.
Nat Commun, 15, 2024
8WI5
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M5PI-bound hMRP5
分子名称: ATP-binding cassette sub-family C member 5
著者Liu, Z.M, Huang, Y.
登録日2023-09-24
公開日2024-07-03
実験手法ELECTRON MICROSCOPY (3.46 Å)
主引用文献Inhibition and transport mechanisms of the ABC transporter hMRP5.
Nat Commun, 15, 2024
8WP8
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Cryo-EM structure of SARS-CoV-2 Omicron BA.2.86 RBD in complex with human ACE2
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Processed angiotensin-converting enzyme 2, ...
著者Li, L.J, Gu, Y.H, Qi, J.X, Gao, G.F.
登録日2023-10-09
公開日2024-07-03
実験手法ELECTRON MICROSCOPY (2.89 Å)
主引用文献Cryo-EM structure of SARS-CoV-2 Omicron BA.2.86 RBD in complex with human ACE2
To Be Published
8WT3
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Crystal structure of peptidoglycan DL-endopeptidase CwlO
分子名称: CHLORIDE ION, Peptidoglycan DL-endopeptidase CwlO
著者Tandukar, S, Kwon, E, Kim, D.Y.
登録日2023-10-17
公開日2024-07-03
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Structural analysis of the peptidoglycan DL-endopeptidase CwlO complexed with its inhibitory protein IseA.
Febs J., 2024
8WT4
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Crystal structure of DL-endopeptidase CwlO complexed with IseA
分子名称: Peptidoglycan DL-endopeptidase CwlO, Uncharacterized protein YoeB
著者Tandukar, S, Kwon, E, Kim, D.Y.
登録日2023-10-17
公開日2024-07-03
実験手法X-RAY DIFFRACTION (1.62 Å)
主引用文献Structural analysis of the peptidoglycan DL-endopeptidase CwlO complexed with its inhibitory protein IseA.
Febs J., 2024
8WWP
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PNPase mutant of Mycobacterium tuberculosis
分子名称: Bifunctional guanosine pentaphosphate synthetase/polyribonucleotide nucleotidyltransferase
著者Wang, N, Sheng, Y.N, Liu, Y.T.
登録日2023-10-26
公開日2024-07-03
実験手法ELECTRON MICROSCOPY (3.12 Å)
主引用文献Cryo-EM structures of Mycobacterium tuberculosis polynucleotide phosphorylase suggest a potential mechanism for its RNA substrate degradation.
Arch.Biochem.Biophys., 754, 2024
8WX0
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PNPase of M.tuberculosis with its RNA substrate
分子名称: Bifunctional guanosine pentaphosphate synthetase/polyribonucleotide nucleotidyltransferase, RNA (24-mer)
著者Wang, N, Sheng, Y.N.
登録日2023-10-27
公開日2024-07-03
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Cryo-EM structures of Mycobacterium tuberculosis polynucleotide phosphorylase suggest a potential mechanism for its RNA substrate degradation.
Arch.Biochem.Biophys., 754, 2024
8WXF
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PNPase of Mycobacterium tuberculosis
分子名称: Bifunctional guanosine pentaphosphate synthetase/polyribonucleotide nucleotidyltransferase
著者Wang, N, Sheng, Y.N, Liu, Y.T.
登録日2023-10-29
公開日2024-07-03
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献Cryo-EM structures of Mycobacterium tuberculosis polynucleotide phosphorylase suggest a potential mechanism for its RNA substrate degradation.
Arch.Biochem.Biophys., 754, 2024
8X4H
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SARS-CoV-2 JN.1 Spike
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
著者Yue, C, Liu, P.
登録日2023-11-15
公開日2024-07-03
実験手法ELECTRON MICROSCOPY (3.65 Å)
主引用文献Spike N354 glycosylation augments SARS-CoV-2 fitness for human adaptation through structural plasticity
Natl Sci Rev, 2024
8X5B
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Cryo-EM structures of human XPR1 in closed states
分子名称: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, CHOLESTEROL, PHOSPHATE ION, ...
著者Jiang, D.H, Yan, R.
登録日2023-11-16
公開日2024-07-03
実験手法ELECTRON MICROSCOPY (2.84 Å)
主引用文献STRUCTURE OF TRANSPORT
To Be Published
8X5E
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Cryo-EM structure of human XPR1 in open state
分子名称: PHOSPHATE ION, Solute carrier family 53 member 1, [(2~{R})-1-[2-azanylethoxy(oxidanyl)phosphoryl]oxy-3-hexadecanoyloxy-propan-2-yl] (~{Z})-octadec-9-enoate
著者Jiang, D.H, Yan, R.
登録日2023-11-17
公開日2024-07-03
実験手法ELECTRON MICROSCOPY (3.61 Å)
主引用文献Structure of transport at 3.6 Angstroms resolution.
To Be Published

222036

件を2024-07-03に公開中

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