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Legacy flatfile-incompatible PDB entries
8OIP
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BU of 8oip by Molmil
28S mammalian mitochondrial small ribosomal subunit with mtRF1 and P-site tRNA
Descriptor: 12S rRNA, 28S ribosomal protein S15, mitochondrial, ...
Authors:Saurer, M, Leibundgut, M, Scaiola, A, Schoenhut, T, Ban, N.
Deposit date:2023-03-23
Release date:2023-05-24
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Molecular basis of translation termination at noncanonical stop codons in human mitochondria.
Science, 380, 2023
8OIQ
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BU of 8oiq by Molmil
39S mammalian mitochondrial large ribosomal subunit with mtRF1 and P-site tRNA
Descriptor: 16S rRNA, 39S ribosomal protein L1, mitochondrial, ...
Authors:Saurer, M, Leibundgut, M, Scaiola, A, Schoenhut, T, Ban, N.
Deposit date:2023-03-23
Release date:2023-06-14
Last modified:2024-06-26
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Molecular basis of translation termination at noncanonical stop codons in human mitochondria.
Science, 380, 2023
8OIR
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BU of 8oir by Molmil
55S human mitochondrial ribosome with mtRF1 and P-site tRNA
Descriptor: 12S rRNA, 16S rRNA, 28S ribosomal protein S10, ...
Authors:Saurer, M, Leibundgut, M, Scaiola, A, Schoenhut, T, Ban, N.
Deposit date:2023-03-23
Release date:2023-06-14
Last modified:2024-06-26
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Molecular basis of translation termination at noncanonical stop codons in human mitochondria.
Science, 380, 2023
8OIS
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BU of 8ois by Molmil
28S human mitochondrial small ribosomal subunit with mtRF1 and P-site tRNA
Descriptor: 12S rRNA, 28S ribosomal protein S10, mitochondrial, ...
Authors:Saurer, M, Leibundgut, M, Scaiola, A, Schoenhut, T, Ban, N.
Deposit date:2023-03-23
Release date:2023-06-14
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Molecular basis of translation termination at noncanonical stop codons in human mitochondria.
Science, 380, 2023
8OIT
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BU of 8oit by Molmil
39S human mitochondrial large ribosomal subunit with mtRF1 and P-site tRNA
Descriptor: 16S rRNA, 39S ribosomal protein L1, mitochondrial, ...
Authors:Saurer, M, Leibundgut, M, Scaiola, A, Schoenhut, T, Ban, N.
Deposit date:2023-03-23
Release date:2023-06-14
Last modified:2024-06-26
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Molecular basis of translation termination at noncanonical stop codons in human mitochondria.
Science, 380, 2023
8OIW
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BU of 8oiw by Molmil
Crystal structure of the cysteine-rich Gallus gallus urate oxidase in complex with the 8-azaxanthine inhibitor under oxidising conditions (space group P 21 21 21)
Descriptor: 1,2-ETHANEDIOL, 8-AZAXANTHINE, CHLORIDE ION, ...
Authors:Di Palma, M, Chegkazi, M, Bui, S, Mori, G, Percudani, R, Steiner, R.A.
Deposit date:2023-03-23
Release date:2024-01-17
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Cysteine Enrichment Mediates Co-Option of Uricase in Reptilian Skin and Transition to Uricotelism.
Mol.Biol.Evol., 40, 2023
8OJ0
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BU of 8oj0 by Molmil
60S ribosomal subunit bound to the E3-UFM1 complex - state 2 (native)
Descriptor: 28S rRNA, 5.8S rRNA, 5S rRNA, ...
Authors:Penchev, I, DaRosa, P.A, Becker, T, Beckmann, R, Kopito, R.
Deposit date:2023-03-23
Release date:2024-02-21
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:UFM1 E3 ligase promotes recycling of 60S ribosomal subunits from the ER.
Nature, 627, 2024
8OJ5
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BU of 8oj5 by Molmil
60S ribosomal subunit bound to the E3-UFM1 complex - state 3 (in-vitro reconstitution)
Descriptor: 28S rRNA, 5.8S rRNA, 5S rRNA, ...
Authors:Penchev, I, DaRosa, P.A, Peter, J.J, Kulathu, Y, Becker, T, Beckmann, R, Kopito, R.
Deposit date:2023-03-23
Release date:2024-02-21
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:UFM1 E3 ligase promotes recycling of 60S ribosomal subunits from the ER.
Nature, 627, 2024
8OJ8
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BU of 8oj8 by Molmil
60S ribosomal subunit bound to the E3-UFM1 complex - state 1 (native)
Descriptor: 28S rRNA, 5.8S rRNA, 5S rRNA, ...
Authors:Penchev, I, DaRosa, P.A, Becker, T, Beckmann, R, Kopito, R.
Deposit date:2023-03-24
Release date:2024-02-21
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:UFM1 E3 ligase promotes recycling of 60S ribosomal subunits from the ER.
Nature, 627, 2024
8OKA
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BU of 8oka by Molmil
Human Mitochondrial Lon Y394F Mutant ADP Bound
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Lon protease homolog, mitochondrial
Authors:Kereiche, S, Bauer, J.A, Matyas, P, Novacek, J, Kutejova, E.
Deposit date:2023-03-28
Release date:2024-04-10
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.89 Å)
Cite:Polyphosphate and tyrosine phosphorylation in the N-terminal domain of the human mitochondrial Lon protease disrupts its functions.
Sci Rep, 14, 2024
8OL4
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BU of 8ol4 by Molmil
Structure of the C-terminal domains of the Bdellovibrio bacteriovorus Bd2439 fibre in complex with GlcNAc
Descriptor: 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, Cell wall surface anchor family protein, ...
Authors:Caulton, S.G, Lovering, A.L.
Deposit date:2023-03-30
Release date:2023-10-25
Last modified:2024-06-26
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Bdellovibrio bacteriovorus uses chimeric fibre proteins to recognize and invade a broad range of bacterial hosts.
Nat Microbiol, 9, 2024
8OLA
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BU of 8ola by Molmil
Carbonic Anhydrase IX like mutant in Complex with Steriod_Sulphamoyl inhibitor VK4
Descriptor: Carbonic anhydrase 2, ZINC ION, [(3~{R},5~{R},8~{R},9~{S},10~{S},13~{S},14~{S},17~{S})-17-ethanoyl-10,13-dimethyl-2,3,4,5,6,7,8,9,11,12,14,15,16,17-tetradecahydro-1~{H}-cyclopenta[a]phenanthren-3-yl] sulfamate
Authors:Brynda, J, Rezacova, P.M, Kudova, E.
Deposit date:2023-03-30
Release date:2024-04-10
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Carbonic Anhydrase II in Complex with Steriod_Sulphamoyl
To Be Published
8OM2
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BU of 8om2 by Molmil
Small subunit of yeast mitochondrial ribosome in complex with METTL17/Rsm22.
Descriptor: 15S mitochondrial rRNA, 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial, ...
Authors:Itoh, Y, Chicherin, I, Kamenski, P, Amunts, A.
Deposit date:2023-03-31
Release date:2024-01-10
Last modified:2024-01-31
Method:ELECTRON MICROSCOPY (2.57 Å)
Cite:METTL17 is an Fe-S cluster checkpoint for mitochondrial translation.
Mol.Cell, 84, 2024
8OM3
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BU of 8om3 by Molmil
Small subunit of yeast mitochondrial ribosome in complex with IF3/Aim23.
Descriptor: 15S mitochondrial rRNA, 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial, ...
Authors:Itoh, Y, Chicherin, I, Kamenski, P, Amunts, A.
Deposit date:2023-03-31
Release date:2024-01-10
Last modified:2024-01-31
Method:ELECTRON MICROSCOPY (2.87 Å)
Cite:METTL17 is an Fe-S cluster checkpoint for mitochondrial translation.
Mol.Cell, 84, 2024
8OM4
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BU of 8om4 by Molmil
Small subunit of yeast mitochondrial ribosome.
Descriptor: 15S mitochondrial rRNA, 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial, ...
Authors:Itoh, Y, Chicherin, I, Kamenski, P, Amunts, A.
Deposit date:2023-03-31
Release date:2024-01-10
Last modified:2024-01-31
Method:ELECTRON MICROSCOPY (2.32 Å)
Cite:METTL17 is an Fe-S cluster checkpoint for mitochondrial translation.
Mol.Cell, 84, 2024
8OM7
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BU of 8om7 by Molmil
Human Mitochondrial Lon Y186E Mutant ADP Bound
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Lon protease homolog, mitochondrial
Authors:Kereiche, S, Bauer, J.A, Matyas, P, Novacek, J, Kutejova, E.
Deposit date:2023-03-31
Release date:2024-04-10
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.74 Å)
Cite:Polyphosphate and tyrosine phosphorylation in the N-terminal domain of the human mitochondrial Lon protease disrupts its functions.
Sci Rep, 14, 2024
8OM8
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BU of 8om8 by Molmil
X-ray structure of lysozyme obtained upon reaction with [VIVO(empp)2] (Structure A)
Descriptor: 1-methyl-2-ethyl-3-hydroxy-4(1H)-pyridinone)V(IV)O4, ACETATE ION, CHLORIDE ION, ...
Authors:Paolillo, M, Ferraro, G, Merlino, A.
Deposit date:2023-03-31
Release date:2023-06-07
Method:X-RAY DIFFRACTION (1.08 Å)
Cite:Implications of Protein Interaction in the Speciation of Potential V IV O-Pyridinone Drugs.
Inorg.Chem., 62, 2023
8OMN
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BU of 8omn by Molmil
Carbonic Anhydrase II in Complex with Steriod_Sulphamoyl VK4
Descriptor: Carbonic anhydrase 2, ZINC ION, [(3~{R},5~{R},8~{R},9~{S},10~{S},13~{S},14~{S},17~{S})-17-ethanoyl-10,13-dimethyl-2,3,4,5,6,7,8,9,11,12,14,15,16,17-tetradecahydro-1~{H}-cyclopenta[a]phenanthren-3-yl] sulfamate
Authors:Brynda, J, Rezacova, P.M, Kudova, E.
Deposit date:2023-03-31
Release date:2024-04-10
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Carbonic Anhydrase II in Complex with Steriod_Sulphamoyl
To Be Published
8OMS
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BU of 8oms by Molmil
X-ray structure of lysozyme obtained upon reaction with [VIVO(empp)2] (Structure B)
Descriptor: Lysozyme C, bis-[(1-methyl-2-ethyl-3-hydroxy-4(1H)-pyridinone)]-V(IV)O2
Authors:Paolillo, M, Ferraro, G, Merlino, A.
Deposit date:2023-03-31
Release date:2023-06-07
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Implications of Protein Interaction in the Speciation of Potential V IV O-Pyridinone Drugs.
Inorg.Chem., 62, 2023
8OMT
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BU of 8omt by Molmil
X-ray structure of lysozyme obtained upon reaction with [VIVO(empp)2] (Structure C)
Descriptor: 1-methyl-2-ethyl-3-hydroxy-4(1H)-pyridinone)V(IV)O4, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Lysozyme C, ...
Authors:Paolillo, M, Merlino, A, Ferraro, G.
Deposit date:2023-03-31
Release date:2023-06-07
Method:X-RAY DIFFRACTION (1.097 Å)
Cite:Implications of Protein Interaction in the Speciation of Potential V IV O-Pyridinone Drugs.
Inorg.Chem., 62, 2023
8ONY
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BU of 8ony by Molmil
Human Methionine Aminopeptidase 2 at the 80S ribosome
Descriptor: 28S rRNA, 5.8S rRNA, 60S ribosomal protein L19, ...
Authors:Klein, M.A, Wild, K, Kisonaite, M, Sinning, I.
Deposit date:2023-04-04
Release date:2024-02-21
Method:ELECTRON MICROSCOPY (2.92 Å)
Cite:Methionine aminopeptidase 2 and its autoproteolysis product have different binding sites on the ribosome.
Nat Commun, 15, 2024
8ONZ
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BU of 8onz by Molmil
Chaetomium thermophilum Methionine Aminopeptidase 2 at the 80S ribosome
Descriptor: 28S rRNA, 5.8S rRNA, 60S ribosomal protein L25-like protein, ...
Authors:Klein, M.A, Wild, K, Kisonaite, M, Sinning, I.
Deposit date:2023-04-04
Release date:2024-02-21
Method:ELECTRON MICROSCOPY (2.94 Å)
Cite:Methionine aminopeptidase 2 and its autoproteolysis product have different binding sites on the ribosome.
Nat Commun, 15, 2024
8OO0
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BU of 8oo0 by Molmil
Chaetomium thermophilum Methionine Aminopeptidase 2 autoproteolysis product at the 80S ribosome
Descriptor: 18S rRNA, 28S rRNA, 40S ribosomal protein S0, ...
Authors:Klein, M.A, Wild, K, Kisonaite, M, Sinning, I.
Deposit date:2023-04-04
Release date:2024-02-21
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Methionine aminopeptidase 2 and its autoproteolysis product have different binding sites on the ribosome.
Nat Commun, 15, 2024
8OO3
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BU of 8oo3 by Molmil
X-ray structure of the adduct formed upon reaction of cisplatin with human angiogenin after 5 days soaking
Descriptor: AMMONIA, Angiogenin, D(-)-TARTARIC ACID, ...
Authors:Ferraro, G, Merlino, A.
Deposit date:2023-04-04
Release date:2023-07-12
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Cisplatin binding to angiogenin protein: new molecular pathways and targets for the drug's anticancer activity.
Dalton Trans, 52, 2023
8OO4
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BU of 8oo4 by Molmil
X-ray structure of the adduct formed upon reaction of cisplatin with human angiogenin after 1 month soaking
Descriptor: AMMONIA, Angiogenin, PLATINUM (II) ION
Authors:Ferraro, G, Merlino, A.
Deposit date:2023-04-04
Release date:2023-07-12
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Cisplatin binding to angiogenin protein: new molecular pathways and targets for the drug's anticancer activity.
Dalton Trans, 52, 2023

222415

數據於2024-07-10公開中

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