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Legacy flatfile-incompatible PDB entries
6KMX
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BU of 6kmx by Molmil
Structure of PSI from H. hongdechloris grown under far-red light condition
Descriptor: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, BETA-CAROTENE, ...
Authors:Kato, K, Nagao, R, Shen, J.R, Miyazaki, N, Akita, F.
Deposit date:2019-08-01
Release date:2020-01-15
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (2.41 Å)
Cite:Structural basis for the adaptation and function of chlorophyll f in photosystem I.
Nat Commun, 11, 2020
6KW4
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BU of 6kw4 by Molmil
The ClassB RSC-Nucleosome Complex
Descriptor: Actin-like protein ARP9, Actin-related protein 7, Chromatin structure-remodeling complex protein RSC3, ...
Authors:Ye, Y.P, Wu, H, Chen, K.J, Verma, N, Cairns, B, Gao, N, Chen, Z.C.
Deposit date:2019-09-06
Release date:2019-11-13
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (7.55 Å)
Cite:Structure of the RSC complex bound to the nucleosome.
Science, 366, 2019
6L4T
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BU of 6l4t by Molmil
Structure of the peripheral FCPI from diatom
Descriptor: (3S,3'R,5R,6S,7cis)-7',8'-didehydro-5,6-dihydro-5,6-epoxy-beta,beta-carotene-3,3'-diol, (3S,3'S,5R,5'R,6S,6'R,8'R)-3,5'-dihydroxy-8-oxo-6',7'-didehydro-5,5',6,6',7,8-hexahydro-5,6-epoxy-beta,beta-caroten-3'- yl acetate, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, ...
Authors:Nagao, R, Kato, K, Miyazaki, N, Akita, F, Shen, J.R.
Deposit date:2019-10-21
Release date:2020-05-20
Last modified:2025-04-09
Method:ELECTRON MICROSCOPY (2.6 Å)
Cite:Structure of photosystem I-light-harvesting supercomplex from a red-lineage diatom
Nat Commun, 2020
6L4U
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BU of 6l4u by Molmil
Structure of the PSI-FCPI supercomplex from diatom
Descriptor: (3S,3'R,5R,6S,7cis)-7',8'-didehydro-5,6-dihydro-5,6-epoxy-beta,beta-carotene-3,3'-diol, (3S,3'S,5R,5'R,6S,6'R,8'R)-3,5'-dihydroxy-8-oxo-6',7'-didehydro-5,5',6,6',7,8-hexahydro-5,6-epoxy-beta,beta-caroten-3'- yl acetate, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, ...
Authors:Nagao, R, Kato, K, Miyazaki, N, Akita, F, Shen, J.R.
Deposit date:2019-10-21
Release date:2020-05-20
Last modified:2025-04-09
Method:ELECTRON MICROSCOPY (2.4 Å)
Cite:Structure of photosystem I-light-harvesting supercomplex from a red-lineage diatom
Nat Commun, 2020
6L9T
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BU of 6l9t by Molmil
Crystal structure of the complex of bovine lactoperoxidase with OSCN at 1.89 A resolution
Descriptor: 1-(OXIDOSULFANYL)METHANAMINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Singh, P.K, Viswanathan, V, Pandey, N, Singh, A, Sinha, M, Singh, R.P, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2019-11-11
Release date:2020-09-16
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Crystal structure of the complex of bovine lactoperoxidase with OSCN at 1.89 A resolution
To Be Published
6LGL
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BU of 6lgl by Molmil
The atomic structure of varicella-zoster virus A-capsid
Descriptor: Major capsid protein, Small capsomere-interacting protein, Triplex capsid protein 1, ...
Authors:Zheng, Q, Li, S.
Deposit date:2019-12-05
Release date:2020-07-29
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (4.4 Å)
Cite:Near-atomic cryo-electron microscopy structures of varicella-zoster virus capsids.
Nat Microbiol, 5, 2020
6LGN
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BU of 6lgn by Molmil
The atomic structure of varicella zoster virus C-capsid
Descriptor: Major capsid protein, Small capsomere-interacting protein, Triplex capsid protein 1, ...
Authors:Li, S, Zheng, Q.
Deposit date:2019-12-05
Release date:2020-07-29
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (5.3 Å)
Cite:Near-atomic cryo-electron microscopy structures of varicella-zoster virus capsids.
Nat Microbiol, 5, 2020
6LKQ
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BU of 6lkq by Molmil
The Structural Basis for Inhibition of Ribosomal Translocation by Viomycin
Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Zhang, L, Wang, Y.H, Lancaster, L, Zhou, J, Noller, H.F.
Deposit date:2019-12-20
Release date:2020-05-06
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:The structural basis for inhibition of ribosomal translocation by viomycin.
Proc.Natl.Acad.Sci.USA, 117, 2020
6LQM
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BU of 6lqm by Molmil
Cryo-EM structure of a pre-60S ribosomal subunit - state C
Descriptor: 28S rRNA, 5.8S rRNA, 5S rRNA, ...
Authors:Liang, X, Zuo, M, Zhang, Y, Li, N, Ma, C, Dong, M, Gao, N.
Deposit date:2020-01-14
Release date:2020-08-26
Last modified:2025-04-09
Method:ELECTRON MICROSCOPY (3.09 Å)
Cite:Structural snapshots of human pre-60S ribosomal particles before and after nuclear export.
Nat Commun, 11, 2020
6LQP
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BU of 6lqp by Molmil
Cryo-EM structure of 90S small subunit preribosomes in transition states (State A)
Descriptor: 13 kDa ribonucleoprotein-associated protein, 18S pre-rRNA, 40S ribosomal protein S1-A, ...
Authors:Du, Y, Ye, K.
Deposit date:2020-01-14
Release date:2020-09-16
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Cryo-EM structure of 90 S small ribosomal subunit precursors in transition states.
Science, 369, 2020
6LQQ
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BU of 6lqq by Molmil
Cryo-EM structure of 90S small subunit preribosomes in transition states (State B)
Descriptor: 13 kDa ribonucleoprotein-associated protein, 18S pre-rRNA, 40S ribosomal protein S1-A, ...
Authors:Du, Y, Ye, K.
Deposit date:2020-01-14
Release date:2020-09-16
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Cryo-EM structure of 90 S small ribosomal subunit precursors in transition states.
Science, 369, 2020
6LQR
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BU of 6lqr by Molmil
Cryo-EM structure of 90S small subunit preribosomes in transition states (State C)
Descriptor: 13 kDa ribonucleoprotein-associated protein, 18S pre-rRNA, 40S ribosomal protein S1-A, ...
Authors:Du, Y, Ye, K.
Deposit date:2020-01-14
Release date:2020-09-16
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (8.6 Å)
Cite:Cryo-EM structure of 90 S small ribosomal subunit precursors in transition states.
Science, 369, 2020
6LQS
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BU of 6lqs by Molmil
Cryo-EM structure of 90S small subunit preribosomes in transition states (State D)
Descriptor: 13 kDa ribonucleoprotein-associated protein, 18S pre-rRNA, 40S ribosomal protein S1-A, ...
Authors:Du, Y, Ye, K.
Deposit date:2020-01-14
Release date:2020-09-16
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Cryo-EM structure of 90 S small ribosomal subunit precursors in transition states.
Science, 369, 2020
6LQT
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BU of 6lqt by Molmil
Cryo-EM structure of 90S small subunit preribosomes in transition states (State E)
Descriptor: 13 kDa ribonucleoprotein-associated protein, 18S pre-rRNA, 40S ribosomal protein S1-A, ...
Authors:Du, Y, Ye, K.
Deposit date:2020-01-14
Release date:2020-09-16
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (4.9 Å)
Cite:Cryo-EM structure of 90 S small ribosomal subunit precursors in transition states.
Science, 369, 2020
6LQU
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BU of 6lqu by Molmil
Cryo-EM structure of 90S small subunit preribosomes in transition states (State A1)
Descriptor: 13 kDa ribonucleoprotein-associated protein, 18S pre-rRNA, 40S ribosomal protein S11-A, ...
Authors:Du, Y, Ye, K.
Deposit date:2020-01-14
Release date:2020-09-16
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Cryo-EM structure of 90 S small ribosomal subunit precursors in transition states.
Science, 369, 2020
6LQV
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BU of 6lqv by Molmil
Cryo-EM structure of 90S small subunit preribosomes in transition states (State C1)
Descriptor: 13 kDa ribonucleoprotein-associated protein, 18S pre-rRNA, 40S ribosomal protein S11-A, ...
Authors:Du, Y, Ye, K.
Deposit date:2020-01-14
Release date:2020-09-16
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (4.8 Å)
Cite:Cryo-EM structure of 90 S small ribosomal subunit precursors in transition states.
Science, 369, 2020
6LSR
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BU of 6lsr by Molmil
Cryo-EM structure of a pre-60S ribosomal subunit - state B
Descriptor: 28S rRNA, 5.8S rRNA, 5S rRNA, ...
Authors:Liang, X, Zuo, M, Zhang, Y, Li, N, Ma, C, Dong, M, Gao, N.
Deposit date:2020-01-20
Release date:2020-08-26
Last modified:2025-04-09
Method:ELECTRON MICROSCOPY (3.13 Å)
Cite:Structural snapshots of human pre-60S ribosomal particles before and after nuclear export.
Nat Commun, 11, 2020
6LSS
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BU of 6lss by Molmil
Cryo-EM structure of a pre-60S ribosomal subunit - state preA
Descriptor: 28S rRNA, 5S rRNA, 60S ribosomal protein L11, ...
Authors:Liang, X, Zuo, M, Zhang, Y, Li, N, Ma, C, Dong, M, Gao, N.
Deposit date:2020-01-20
Release date:2020-08-26
Last modified:2025-04-09
Method:ELECTRON MICROSCOPY (3.23 Å)
Cite:Structural snapshots of human pre-60S ribosomal particles before and after nuclear export.
Nat Commun, 11, 2020
6LSY
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BU of 6lsy by Molmil
AAA+ ATPase, ClpL from Streptococcus pneumoniae - ATP bound
Descriptor: ATP-dependent Clp protease, ATP-binding subunit
Authors:Kim, G, Lee, S.G, Han, S, Jung, J, Jeong, H.S, Hyun, J.K, Rhee, D.K, Kim, H.M, Lee, S.
Deposit date:2020-01-20
Release date:2021-01-27
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (6.33 Å)
Cite:ClpL is a functionally active tetradecameric AAA+ chaperone, distinct from hexameric/dodecameric ones.
Faseb J., 34, 2020
6LU8
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BU of 6lu8 by Molmil
Cryo-EM structure of a human pre-60S ribosomal subunit - state A
Descriptor: 28S rRNA, 5.8S rRNA, 5S rRNA, ...
Authors:Liang, X, Zuo, M, Zhang, Y, Li, N, Ma, C, Dong, M, Gao, N.
Deposit date:2020-01-26
Release date:2020-08-26
Last modified:2025-04-09
Method:ELECTRON MICROSCOPY (3.13 Å)
Cite:Structural snapshots of human pre-60S ribosomal particles before and after nuclear export.
Nat Commun, 11, 2020
6M2W
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BU of 6m2w by Molmil
Structure of RyR1 (Ca2+/Caffeine/ATP/CaM1234/CHL)
Descriptor: 5-bromanyl-N-[4-chloranyl-2-methyl-6-(methylcarbamoyl)phenyl]-2-(3-chloranylpyridin-2-yl)pyrazole-3-carboxamide, ADENOSINE-5'-TRIPHOSPHATE, CAFFEINE, ...
Authors:Ma, R, Haji-Ghassemi, O, Ma, D, Lin, L, Samurkas, A, Van Petegem, F, Yuchi, Z.
Deposit date:2020-03-01
Release date:2020-09-02
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structural basis for diamide modulation of ryanodine receptor.
Nat.Chem.Biol., 16, 2020
6M62
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BU of 6m62 by Molmil
Cryo-Em structure of eukaryotic pre-60S ribosome subunit from Saccharomyces cerevisiae rpf2 delta 255-344 strain, C4 state.
Descriptor: 60S ribosomal protein L11-A, 60S ribosomal protein L13-A, 60S ribosomal protein L14-A, ...
Authors:Li, Y, Micic, J.
Deposit date:2020-03-12
Release date:2020-08-26
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Coupling of 5S RNP rotation with maturation of functional centers during large ribosomal subunit assembly.
Nat Commun, 11, 2020
6M8P
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BU of 6m8p by Molmil
Human ERAP1 bound to phosphinic pseudotripeptide inhibitor DG013
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Endoplasmic reticulum aminopeptidase 1, Nalpha-[(2S)-2-{[[(1R)-1-amino-3-phenylpropyl](hydroxy)phosphoryl]methyl}-4-methylpentanoyl]-L-tryptophanamide, ...
Authors:Maben, Z, Stern, L.J.
Deposit date:2018-08-22
Release date:2019-12-18
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (3.31 Å)
Cite:Conformational dynamics linked to domain closure and substrate binding explain the ERAP1 allosteric regulation mechanism.
Nat Commun, 12, 2021
6M99
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BU of 6m99 by Molmil
In situ structure of transcriptional enzyme complex and asymmetric inner capsid protein of aquareovirus at primed state
Descriptor: PHOSPHATE ION, Putative core protein NTPase/VP5, VP2, ...
Authors:Ding, K, Zhou, Z.H.
Deposit date:2018-08-23
Release date:2018-09-05
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:In SituStructures of the Polymerase Complex and RNA Genome Show How Aquareovirus Transcription Machineries Respond to Uncoating.
J. Virol., 92, 2018
6MPG
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BU of 6mpg by Molmil
Cryo-EM structure at 3.2 A resolution of HIV-1 fusion peptide-directed antibody, A12V163-b.01, elicited by vaccination of Rhesus macaques, in complex with stabilized HIV-1 Env BG505 DS-SOSIP, which was also bound to antibodies VRC03 and PGT122
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, A12V163-b.01 Heavy Chain, ...
Authors:Acharya, P, Kwong, P.D.
Deposit date:2018-10-06
Release date:2019-07-24
Last modified:2024-11-20
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Antibody Lineages with Vaccine-Induced Antigen-Binding Hotspots Develop Broad HIV Neutralization.
Cell, 178, 2019

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数据于2025-07-02公开中

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