Legacy flatfile-incompatible PDB entries

7TI4	Adeno-associated Virus Go.1 at 2.9 Angstroms resolution, AAVGo.1 AAV-Go Descriptor: Capsid protein Authors: Silveria, M, Large, E. Deposit date: 2022-01-12 Release date: 2022-11-23 Last modified: 2024-06-05 Method: ELECTRON MICROSCOPY (2.93 Å) Cite: Cross-Species Permissivity: Structure of a Goat Adeno-Associated Virus and Its Complex with the Human Receptor AAVR. J.Virol., 96, 2022
7TI5	Adeno-associated virus Go.1 in Complex With Its Cellular Receptor AAVR at 2.4 Angstroms Resolution, AAVGo.1 AAVR Descriptor: Capsid protein, Dyslexia-associated protein KIAA0319-like protein Authors: Silveria, M, Large, E. Deposit date: 2022-01-12 Release date: 2022-11-23 Last modified: 2024-06-05 Method: ELECTRON MICROSCOPY (2.4 Å) Cite: Cross-Species Permissivity: Structure of a Goat Adeno-Associated Virus and Its Complex with the Human Receptor AAVR. J.Virol., 96, 2022
7TJS	Yeast ATP synthase F1 region State 1-3catalytic beta_tight closed without exogenous ATP Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase subunit alpha, ... Authors: Guo, H, Rubinstein, J.L. Deposit date: 2022-01-17 Release date: 2022-04-20 Last modified: 2024-02-21 Method: ELECTRON MICROSCOPY (3.2 Å) Cite: Structure of ATP synthase under strain during catalysis. Nat Commun, 13, 2022
7TJT	Yeast ATP synthase F1 region State 1-3catalytic beta_tight open without exogenous ATP Descriptor: ADENOSINE-5'-TRIPHOSPHATE, ATP synthase subunit alpha, ATP synthase subunit beta, ... Authors: Guo, H, Rubinstein, J.L. Deposit date: 2022-01-17 Release date: 2022-04-20 Last modified: 2024-02-21 Method: ELECTRON MICROSCOPY (3.2 Å) Cite: Structure of ATP synthase under strain during catalysis. Nat Commun, 13, 2022
7TJV	Yeast ATP synthase F1 region State 1catalytic(a) with 10 mM ATP Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase subunit alpha, ... Authors: Guo, H, Rubinstein, J.L. Deposit date: 2022-01-17 Release date: 2022-04-20 Last modified: 2024-02-21 Method: ELECTRON MICROSCOPY (3.6 Å) Cite: Structure of ATP synthase under strain during catalysis. Nat Commun, 13, 2022
7TJY	Yeast ATP synthase State 1catalytic(a) without exogenous ATP backbone model Descriptor: ATP synthase protein 8, ATP synthase subunit 4, ATP synthase subunit 5, ... Authors: Guo, H, Rubinstein, J.L. Deposit date: 2022-01-17 Release date: 2022-04-20 Last modified: 2024-02-21 Method: ELECTRON MICROSCOPY (3.8 Å) Cite: Structure of ATP synthase under strain during catalysis. Nat Commun, 13, 2022
7TK0	Yeast ATP synthase State 1catalytic(c) without exogenous ATP backbone model Descriptor: ATP synthase protein 8, ATP synthase subunit 4, ATP synthase subunit 5, ... Authors: Guo, H, Rubinstein, J.L. Deposit date: 2022-01-17 Release date: 2022-04-20 Last modified: 2024-02-21 Method: ELECTRON MICROSCOPY (4.4 Å) Cite: Structure of ATP synthase under strain during catalysis. Nat Commun, 13, 2022
7TK3	Yeast ATP synthase State 1binding(b) with 10 mM ATP backbone model Descriptor: ATP synthase protein 8, ATP synthase subunit 4, ATP synthase subunit 5, ... Authors: Guo, H, Rubinstein, J.L. Deposit date: 2022-01-17 Release date: 2022-04-20 Last modified: 2024-02-21 Method: ELECTRON MICROSCOPY (6.3 Å) Cite: Structure of ATP synthase under strain during catalysis. Nat Commun, 13, 2022
7TK6	Yeast ATP synthase State 1catalytic(a) with 10 mM ATP backbone model Descriptor: ATP synthase protein 8, ATP synthase subunit 4, ATP synthase subunit 5, ... Authors: Guo, H, Rubinstein, J.L. Deposit date: 2022-01-17 Release date: 2022-04-20 Last modified: 2024-02-21 Method: ELECTRON MICROSCOPY (6.5 Å) Cite: Structure of ATP synthase under strain during catalysis. Nat Commun, 13, 2022
7TKM	Yeast ATP synthase State 3binding(b) with 10 mM ATP backbone model Descriptor: ATP synthase protein 8, ATP synthase subunit 4, ATP synthase subunit 5, ... Authors: Guo, H, Rubinstein, J.L. Deposit date: 2022-01-17 Release date: 2022-05-11 Last modified: 2024-02-21 Method: ELECTRON MICROSCOPY (4.5 Å) Cite: Structure of ATP synthase under strain during catalysis. Nat Commun, 13, 2022
7TKQ	Yeast ATP synthase State 3catalytic(c) with 10 mM ATP backbone model Descriptor: ATP synthase protein 8, ATP synthase subunit 4, ATP synthase subunit 5, ... Authors: Guo, H, Rubinstein, J.L. Deposit date: 2022-01-17 Release date: 2022-05-11 Last modified: 2024-02-21 Method: ELECTRON MICROSCOPY (4.5 Å) Cite: Structure of ATP synthase under strain during catalysis. Nat Commun, 13, 2022
7TM3	Structure of the rabbit 80S ribosome stalled on a 2-TMD Rhodopsin intermediate in complex with the multipass translocon Descriptor: 28S ribosomal RNA, 5.8S ribosomal RNA, 5S ribosomal RNA, ... Authors: Kim, M.K, Lewis, A.J.O, Keenan, R.J, Hegde, R.S. Deposit date: 2022-01-19 Release date: 2022-10-19 Last modified: 2024-06-05 Method: ELECTRON MICROSCOPY (3.25 Å) Cite: Mechanism of an intramembrane chaperone for multipass membrane proteins. Nature, 611, 2022
7TMS	V-ATPase from Saccharomyces cerevisiae, State 2 Descriptor: ADENOSINE-5'-DIPHOSPHATE, H(+)-transporting two-sector ATPase, V-ATPase subunit E, ... Authors: Vasanthakumar, T, Keon, K.A, Bueler, S.A, Jaskolka, M.C, Rubinstein, J.L. Deposit date: 2022-01-20 Release date: 2022-04-13 Last modified: 2024-02-21 Method: ELECTRON MICROSCOPY (3.8 Å) Cite: Coordinated conformational changes in the V 1 complex during V-ATPase reversible dissociation. Nat.Struct.Mol.Biol., 29, 2022
7TMT	V-ATPase from Saccharomyces cerevisiae, State 3 Descriptor: ADENOSINE-5'-DIPHOSPHATE, H(+)-transporting two-sector ATPase, V-ATPase subunit E, ... Authors: Vasanthakumar, T, Keon, K.A, Bueler, S.A, Jaskolka, M.C, Rubinstein, J.L. Deposit date: 2022-01-20 Release date: 2022-04-20 Last modified: 2024-02-21 Method: ELECTRON MICROSCOPY (3.8 Å) Cite: Coordinated conformational changes in the V 1 complex during V-ATPase reversible dissociation. Nat.Struct.Mol.Biol., 29, 2022
7TN1	Multistate design to stabilize viral class I fusion proteins Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Fusion glycoprotein F0 Authors: Huang, J, Banerjee, A, Gonzalez, K, Mousa, J, Strauch, E. Deposit date: 2022-01-20 Release date: 2023-07-12 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (3.1 Å) Cite: Multistate design to stabilize viral class I fusion proteins To Be Published
7TNB	Caulobacter segnis arene reductase (CSAR) - WT Descriptor: ACETATE ION, FLAVIN MONONUCLEOTIDE, NADH:flavin oxidoreductase/NADH oxidase, ... Authors: Garfinkle, S.E, Jeffrey, P, Hyster, T.K. Deposit date: 2022-01-20 Release date: 2022-08-24 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (1.79 Å) Cite: An asymmetric sp 3 -sp 3 cross-electrophile coupling using 'ene'-reductases. Nature, 610, 2022
7TNQ	The symmetry-released subpellicular microtubule map from detergent-extracted Toxoplasma cells Descriptor: Microtubule associated protein SPM1, PDI family protein, Tubulin alpha chain, ... Authors: Sun, S.Y, Pintilie, G.D, Chen, M. Deposit date: 2022-01-21 Release date: 2022-06-22 Method: ELECTRON MICROSCOPY (8.4 Å) Cite: Cryo-ET of Toxoplasma parasites gives subnanometer insight into tubulin-based structures. Proc.Natl.Acad.Sci.USA, 119, 2022
7TNS	Subpellicular microtubule from detergent-extract Toxoplasma gondii cells Descriptor: Microtubule associated protein SPM1, PDI family protein, Tubulin alpha chain, ... Authors: Sun, S.Y, Pintilie, G.D, Chen, M, Chiu, W. Deposit date: 2022-01-21 Release date: 2022-06-22 Method: ELECTRON MICROSCOPY (6.7 Å) Cite: Cryo-ET of Toxoplasma parasites gives subnanometer insight into tubulin-based structures. Proc.Natl.Acad.Sci.USA, 119, 2022
7TNT	The tubulin-based conoid from detergent-extract Toxoplasma gondii cells Descriptor: Tubulin alpha chain, Tubulin beta chain Authors: Sun, S.Y, Pintilie, G.D, Chen, M, Chiu, W. Deposit date: 2022-01-21 Release date: 2022-06-22 Method: ELECTRON MICROSCOPY (9.3 Å) Cite: Cryo-ET of Toxoplasma parasites gives subnanometer insight into tubulin-based structures. Proc.Natl.Acad.Sci.USA, 119, 2022
7TOK	Crystal structure of the CBM domain of carbohydrate esterase FjoAcXE Descriptor: Acetylxylan esterase I Authors: Stogios, P.J, Skarina, T, Di Leo, R, Jurak, E, Master, E. Deposit date: 2022-01-24 Release date: 2022-04-13 Last modified: 2022-11-02 Method: X-RAY DIFFRACTION (2.45 Å) Cite: Elucidating Sequence and Structural Determinants of Carbohydrate Esterases for Complete Deacetylation of Substituted Xylans. Molecules, 27, 2022
7TOO	Yeast 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein GR20 Descriptor: 25S rRNA, 5.8S rRNA, 5S rRNA, ... Authors: Loveland, A.B, Svidritskiy, E, Susorov, D, Lee, S, Park, A, Zvornicanin, S, Demo, G, Gao, F.B, Korostelev, A.A. Deposit date: 2022-01-24 Release date: 2022-05-25 Last modified: 2022-06-01 Method: ELECTRON MICROSCOPY (2.7 Å) Cite: Ribosome inhibition by C9ORF72-ALS/FTD-associated poly-PR and poly-GR proteins revealed by cryo-EM. Nat Commun, 13, 2022
7TOP	Yeast 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein PR20 Descriptor: 25S rRNA, 5.8S rRNA, 5S rRNA, ... Authors: Loveland, A.B, Svidritskiy, E, Susorov, D, Lee, S, Park, A, Zvornicanin, S, Demo, G, Gao, F.B, Korostelev, A.A. Deposit date: 2022-01-24 Release date: 2022-05-25 Last modified: 2024-02-21 Method: ELECTRON MICROSCOPY (2.4 Å) Cite: Ribosome inhibition by C9ORF72-ALS/FTD-associated poly-PR and poly-GR proteins revealed by cryo-EM. Nat Commun, 13, 2022
7TOQ	Mammalian 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein poly-PR Descriptor: 18S rRNA, 28S rRNA, 40S ribosomal protein S10, ... Authors: Loveland, A.B, Svidritskiy, E, Susorov, D, Lee, S, Park, A, Zvornicanin, S, Demo, G, Gao, F.B, Korostelev, A.A. Deposit date: 2022-01-24 Release date: 2022-05-25 Last modified: 2024-02-21 Method: ELECTRON MICROSCOPY (3.1 Å) Cite: Ribosome inhibition by C9ORF72-ALS/FTD-associated poly-PR and poly-GR proteins revealed by cryo-EM. Nat Commun, 13, 2022
7TOR	Mammalian 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein GR20 Descriptor: 18S rRNA, 28S rRNA, 40S ribosomal protein S10, ... Authors: Loveland, A.B, Svidritskiy, E, Susorov, D, Lee, S, Park, A, Zvornicanin, S, Demo, G, Gao, F.B, Korostelev, A.A. Deposit date: 2022-01-24 Release date: 2022-05-25 Last modified: 2022-06-01 Method: ELECTRON MICROSCOPY (2.9 Å) Cite: Ribosome inhibition by C9ORF72-ALS/FTD-associated poly-PR and poly-GR proteins revealed by cryo-EM. Nat Commun, 13, 2022
7TOS	E. coli 70S ribosomes bound with the ALS/FTD-associated dipeptide repeat protein PR20 Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... Authors: Loveland, A.B, Svidritskiy, E, Susorov, D, Lee, S, Park, A, Zvornicanin, S, Demo, G, Gao, F.B, Korostelev, A.A. Deposit date: 2022-01-24 Release date: 2022-05-25 Last modified: 2024-02-21 Method: ELECTRON MICROSCOPY (2.9 Å) Cite: Ribosome inhibition by C9ORF72-ALS/FTD-associated poly-PR and poly-GR proteins revealed by cryo-EM. Nat Commun, 13, 2022

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