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PDB形式変換不可の PDB エントリー
9CPI
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BU of 9cpi by Molmil
Structures of small molecules bound to RNA repeat expansions that cause Huntington's disease-like 2 and myotonic dystrophy type 1
分子名称: 4-[1-(2-aminoethyl)-4,5-dihydro-1H-imidazol-2-yl]-N-[4-(4,5-dihydro-1H-imidazol-2-yl)phenyl]benzamide, RNA (5'-R(*GP*AP*CP*AP*GP*CP*UP*GP*CP*UP*GP*UP*C)-3')
著者Chen, J.L, Taghavi, A, Disney, M.D, Fountain, M.A, Childs-Disney, J.L.
登録日2024-07-18
公開日2024-08-07
最終更新日2024-08-14
実験手法SOLUTION NMR
主引用文献NMR structures of small molecules bound to a model of a CUG RNA repeat expansion.
Bioorg.Med.Chem.Lett., 111, 2024
9CSG
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Human Serum Albumin Bound to Cerastecin Compound 5e
分子名称: 2-(4-butylbenzene-1-sulfonamido)-5-(4-{3-carboxy-4-[4-(2-methoxyethyl)benzene-1-sulfonamido]anilino}-4-oxobutanamido)benzoic acid, Albumin, MYRISTIC ACID
著者Hruza, A, Klein, D.J, Ishchenko, A.
登録日2024-07-23
公開日2024-09-04
最終更新日2024-10-02
実験手法X-RAY DIFFRACTION (1.914 Å)
主引用文献Cerastecin Inhibition of the Lipooligosaccharide Transporter MsbA to Combat Acinetobacter baumannii : From Screening Impurity to In Vivo Efficacy.
J.Med.Chem., 67, 2024
9CSI
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A. baumannii MsbA Bound to Cerastecin Compound 5
分子名称: 3,3'-[(1,4-dioxobutane-1,4-diyl)bis(azanediyl)]bis[(4-butylbenzene-1-sulfonamido)benzoic acid], Lipid A export ATP-binding/permease protein MsbA, MAGNESIUM ION, ...
著者Klein, D.J, Ishchenko, A, Soisson, S, Cheng, R, Hennig, M.
登録日2024-07-23
公開日2024-09-04
最終更新日2024-10-02
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Cerastecin Inhibition of the Lipooligosaccharide Transporter MsbA to Combat Acinetobacter baumannii : From Screening Impurity to In Vivo Efficacy.
J.Med.Chem., 67, 2024
9CSY
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BU of 9csy by Molmil
SARS-CoV-2 papain-like protease (PLpro) bound to PF-07957472
分子名称: 2-methyl-5-(4-methylpiperazin-1-yl)-N-{1-[(2P)-2-(1-methyl-1H-pyrazol-4-yl)quinolin-4-yl]cyclopropyl}benzamide, Papain-like protease, ZINC ION, ...
著者Mashalidis, E.H, Chang, J.S, Wu, H, Garnsey, M.
登録日2024-07-24
公開日2024-10-02
実験手法X-RAY DIFFRACTION (2.595 Å)
主引用文献Discovery of SARS-CoV-2 papain-like protease (PL pro ) inhibitors with efficacy in a murine infection model.
Sci Adv, 10, 2024
9CTH
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BU of 9cth by Molmil
Preliminary map of the Prothrombin-prothrombinase complex on nano discs
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Activated Factor V (FVa) heavy chain, Activated Factor V (FVa) light chain, ...
著者Stojanovski, B.M, Mohammed, B.M, Di Cera, E.
登録日2024-07-25
公開日2024-08-07
最終更新日2024-08-14
実験手法ELECTRON MICROSCOPY (6.47 Å)
主引用文献The Prothrombin-Prothrombinase Interaction.
Subcell Biochem, 104, 2024
9CUO
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BU of 9cuo by Molmil
Crystal structure of CRBN with compound 3
分子名称: (3S)-3-(3-methyl-2-oxo-2,3-dihydro-1H-1,3-benzimidazol-1-yl)piperidine-2,6-dione, 1,2-ETHANEDIOL, Protein cereblon, ...
著者Zheng, X, Ji, N, Campbell, V, Slavin, A, Zhu, X, Chen, D, Rong, H, Enerson, B, Mayo, M, Sharma, K, Browne, C.M, Klaus, C.R, Li, H, Massa, G, McDonald, A.A, Shi, Y, Sintchak, M, Skouras, S, Walther, D.M, Yuan, K, Zhang, Y, Kelleher, J, Guang, L, Luo, X, Mainolfi, N, Weiss, M.M.
登録日2024-07-26
公開日2024-08-28
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Discovery of KT-474─a Potent, Selective, and Orally Bioavailable IRAK4 Degrader for the Treatment of Autoimmune Diseases.
J.Med.Chem., 2024
9CUW
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Crystal Structure of SETDB1 Tudor domain in complex with UNC100013
分子名称: (2E)-4-(dimethylamino)-N-(4-{[6-(dimethylamino)hexyl]amino}-2-{[5-(dimethylamino)pentyl]amino}quinazolin-6-yl)but-2-enamide, 1,2-ETHANEDIOL, Histone-lysine N-methyltransferase SETDB1, ...
著者Silva, M, Dong, A, Arrowsmith, C.H, Edwards, A.M, Halabelian, L, Structural Genomics Consortium (SGC)
登録日2024-07-26
公開日2024-10-02
実験手法X-RAY DIFFRACTION (1.53 Å)
主引用文献Crystal Structure of SETDB1 Tudor domain in complex with UNC100013
To be published
9CUX
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Crystal Structure of SETDB1 Tudor domain in complex with UNC100016
分子名称: (2E)-N-(4-{[6-(dimethylamino)hexyl]amino}-2-{[5-(dimethylamino)pentyl]amino}quinazolin-6-yl)but-2-enamide, 1,2-ETHANEDIOL, Histone-lysine N-methyltransferase SETDB1, ...
著者Silva, M, Dong, A, Arrowsmith, C.H, Edwards, A.M, Halabelian, L, Structural Genomics Consortium (SGC)
登録日2024-07-26
公開日2024-10-02
実験手法X-RAY DIFFRACTION (1.27 Å)
主引用文献Crystal Structure of SETDB1 Tudor domain in complex with UNC100016
To be published
9CUZ
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Bufavirus 1 complexed with 6SLN
分子名称: N-acetyl-alpha-neuraminic acid, VP1
著者Gulkis, M.C, McKenna, R, Bennett, A.D.
登録日2024-07-27
公開日2024-09-18
実験手法ELECTRON MICROSCOPY (2.16 Å)
主引用文献Structural Characterization of Human Bufavirus 1: Receptor Binding and Endosomal pH-Induced Changes.
Viruses, 16, 2024
9CV0
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BU of 9cv0 by Molmil
Bufavirus 1 at pH 7.4
分子名称: VP1
著者Gulkis, M.C, McKenna, R, Bennett, A.D.
登録日2024-07-27
公開日2024-08-28
最終更新日2024-09-18
実験手法ELECTRON MICROSCOPY (2.84 Å)
主引用文献Structural Characterization of Human Bufavirus 1: Receptor Binding and Endosomal pH-Induced Changes.
Viruses, 16, 2024
9CV9
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BU of 9cv9 by Molmil
Bufavirus 1 at pH 4.0
分子名称: VP1
著者Gulkis, M.C, McKenna, R, Bennett, A.D.
登録日2024-07-28
公開日2024-08-28
最終更新日2024-09-18
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Structural Characterization of Human Bufavirus 1: Receptor Binding and Endosomal pH-Induced Changes.
Viruses, 16, 2024
9CWS
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Bufavirus 1 at pH 2.6
分子名称: VP1
著者Gulkis, M.C, McKenna, R, Bennett, A.D.
登録日2024-07-30
公開日2024-08-21
最終更新日2024-09-18
実験手法ELECTRON MICROSCOPY (2.73 Å)
主引用文献Structural Characterization of Human Bufavirus 1: Receptor Binding and Endosomal pH-Induced Changes.
Viruses, 16, 2024
9D3E
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BU of 9d3e by Molmil
Cryo-EM structure of CCR6 bound by SQA1 and OXM2
分子名称: 4-[[3,4-bis(oxidanylidene)-2-[[(1~{R})-1-(4-propan-2-ylfuran-2-yl)propyl]amino]cyclobuten-1-yl]amino]-~{N},~{N}-dimethyl-3-oxidanyl-pyridine-2-carboxamide, CHOLESTEROL, Human CCR6, ...
著者Wasilko, D.J, Wu, H.
登録日2024-08-09
公開日2024-09-11
実験手法ELECTRON MICROSCOPY (3.02 Å)
主引用文献Structural basis for CCR6 modulation by allosteric antagonists.
Nat Commun, 15, 2024
9D3G
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BU of 9d3g by Molmil
Cryo-EM structure of CCR6 bound by SQA1 and OXM1
分子名称: 1-(4-chlorophenyl)-N-{[(2R)-4-(2,3-dihydro-1H-inden-2-yl)-5-oxomorpholin-2-yl]methyl}cyclopropane-1-carboxamide, 4-[[3,4-bis(oxidanylidene)-2-[[(1~{R})-1-(4-propan-2-ylfuran-2-yl)propyl]amino]cyclobuten-1-yl]amino]-~{N},~{N}-dimethyl-3-oxidanyl-pyridine-2-carboxamide, CCR6, ...
著者Wasilko, D.J, Wu, H.
登録日2024-08-10
公開日2024-09-11
実験手法ELECTRON MICROSCOPY (3.26 Å)
主引用文献Structural basis for CCR6 modulation by allosteric antagonists.
Nat Commun, 15, 2024
9D5D
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BU of 9d5d by Molmil
Crystal Structure of Blood Coagulation Factor VIII C2 Domain Mutant L2251A/L2252A
分子名称: Factor VIIIa light chain
著者Avery, N.G, Childers, K.C, Spiegel, P.C.
登録日2024-08-13
公開日2024-09-04
実験手法X-RAY DIFFRACTION (1.83 Å)
主引用文献Biophysical characterization of blood coagulation factor VIII binding to lipid nanodiscs that mimic activated platelet surfaces
To Be Published
9D77
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BU of 9d77 by Molmil
Crystal form of Netrin-1 mimics nanotubes
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
著者Meier, M, Krahn, N.J, McDougall, M.D, Rafiei, F, Koch, M, Stetefeld, J.
登録日2024-08-16
公開日2024-10-09
実験手法X-RAY DIFFRACTION (3.4 Å)
主引用文献Mechanistic insights in the higher-order protein assemblies of netrin-1
To Be Published
9D93
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Mycobacteriophage Bxb1 tail tip - Composite map and model
分子名称: Major tail protein, Minor tail protein, Tapemeasure protein
著者Freeman, K.G.
登録日2024-08-20
公開日2024-09-25
実験手法ELECTRON MICROSCOPY (2.85 Å)
主引用文献Structure and infection dynamics of mycobacteriophage Bxb1
To Be Published
9D94
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Mycobacteriophage Bxb1 portal and connector assembly - Composite map and model
分子名称: Head-to-tail adaptor, Head-to-tail stopper, Major tail protein, ...
著者Freeman, K.G.
登録日2024-08-20
公開日2024-09-25
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Structure and infection dynamics of mycobacteriophage Bxb1
To Be Published
9D9K
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BU of 9d9k by Molmil
Crystal structure of MurC from Pseudomonas aeruginosa in complex with inhibitor M17
分子名称: 2-{[(4-amino-5,6-dimethylthieno[2,3-d]pyrimidin-2-yl)methyl]sulfanyl}pyridine-3-carboxylic acid, CHLORIDE ION, SULFATE ION, ...
著者Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2024-08-21
公開日2024-09-04
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (2.63 Å)
主引用文献Crystal structure of MurC from Pseudomonas aeruginosa in complex with inhibitor M17
To be published
9D9W
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Mycobacteriophage Bxb1 C1 Capsid and Portal - Composite map and model
分子名称: Major capsid protein, Portal protein
著者Freeman, K.G.
登録日2024-08-21
公開日2024-10-09
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Structure and infection dynamics of mycobacteriophage Bxb1
To Be Published
9D9X
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BU of 9d9x by Molmil
Mycobacteriophage Bxb1 Capsid - Composite map and model
分子名称: Major capsid protein
著者Freeman, K.G.
登録日2024-08-21
公開日2024-09-25
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Structure and infection dynamics of mycobacteriophage Bxb1
To Be Published
9DHG
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DHODH in complex with Compound 5
分子名称: (3P,7P)-7-[4-ethyl-3-(hydroxymethyl)-5-oxo-4,5-dihydro-1H-1,2,4-triazol-1-yl]-6-fluoro-3-(2-methylphenyl)-1-(propan-2-yl)quinolin-4(1H)-one, 1,2-ETHANEDIOL, ACETATE ION, ...
著者Shaffer, P.L.
登録日2024-09-03
公開日2024-10-09
実験手法X-RAY DIFFRACTION (1.386 Å)
主引用文献Identification of isoquinolinone DHODH inhibitor isosteres.
Bioorg.Med.Chem.Lett., 2024
9DHH
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DHODH in complex with Compound 8
分子名称: (3S,7P)-7-[4-ethyl-3-(hydroxymethyl)-5-oxo-4,5-dihydro-1H-1,2,4-triazol-1-yl]-6-fluoro-3-(2-methylphenyl)-1-(propan-2-yl)-2,3-dihydroquinolin-4(1H)-one, 1,2-ETHANEDIOL, ACETATE ION, ...
著者Shaffer, P.L.
登録日2024-09-03
公開日2024-10-09
実験手法X-RAY DIFFRACTION (1.49 Å)
主引用文献Identification of isoquinolinone DHODH inhibitor isosteres.
Bioorg.Med.Chem.Lett., 2024
9DHI
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DHODH in complex with Compound 7
分子名称: (2M,6P)-6-[4-ethyl-3-(hydroxymethyl)-5-oxo-4,5-dihydro-1H-1,2,4-triazol-1-yl]-7-fluoro-2-(2-methylphenyl)-4-(propan-2-yl)phthalazin-1(2H)-one, 1,2-ETHANEDIOL, ACETATE ION, ...
著者Shaffer, P.L.
登録日2024-09-03
公開日2024-10-09
実験手法X-RAY DIFFRACTION (1.38 Å)
主引用文献Identification of isoquinolinone DHODH inhibitor isosteres.
Bioorg.Med.Chem.Lett., 2024
9DHJ
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DHODH in complex with Compound 15
分子名称: (2M,6P)-6-[4-ethyl-3-(hydroxymethyl)-5-oxo-4,5-dihydro-1H-1,2,4-triazol-1-yl]-7-fluoro-2-(2-methylphenyl)-4-[(2R)-1,1,1-trifluoropropan-2-yl]phthalazin-1(2H)-one, 1,2-ETHANEDIOL, ACETATE ION, ...
著者Shaffer, P.L.
登録日2024-09-03
公開日2024-10-09
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Identification of isoquinolinone DHODH inhibitor isosteres.
Bioorg.Med.Chem.Lett., 2024

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件を2024-10-09に公開中

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